Castellaniella ginsengisoli: ABRZ00_07615
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Entry
ABRZ00_07615 CDS
T10938
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin00540
Lipopolysaccharide biosynthesis
cgin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ABRZ00_07615 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cgin01005
]
ABRZ00_07615 (lpxC)
Enzymes [BR:
cgin01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
ABRZ00_07615 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
cgin01005
]
Lipid A
ABRZ00_07615 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
XDJ54454
UniProt:
A0AB39DTV9
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All DBs
Position
1598283..1599206
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AA seq
307 aa
AA seq
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MLLQRTIKQSVTTTGVGVHSGRRVKITLRPAEPNTGIVFHRVDLPEVVDLPARADAVGDT
RMASVLQQGSVRVSTVEHLMSALAGLGVDNLHVDLDAEEVPIMDGSAATFVYLLRSAGLL
EQAAPKRFLRVLKPVEVREGEGPAAKWARLEPYDGFALSFSIDFKHPAIDSTANTAEIDF
ARDSYVKTIARARTFGFASEVEALRSMGLARGGSLDNAIVMDEYRVLNADGLRYDDEFVK
HKILDAIGDLYLAGRPLVARYVACKSGHGLNNLLVRALLAQQDCWELISYESRDAAPAAF
TRDWQLA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgcagcgcaccatcaaacagtccgtgaccaccaccggcgtcggcgtgcattcc
ggccgccgcgtgaaaatcaccctgcgcccggccgagcccaataccggcatcgtgttccac
cgcgtggatctgcctgaagtcgtggatctgcccgcgcgcgccgatgcggtgggcgacacc
cggatggcatccgtcctgcagcagggctccgtgcgcgtatccaccgtcgagcacctgatg
tcggccttggccgggctgggcgtggacaatctgcacgtcgatctcgacgccgaagaagtc
cccatcatggatggcagcgcggccacgttcgtctatctgctgcgcagcgccggtctgctg
gagcaggccgcccccaagcgcttcctgcgggtgctcaagcccgtcgaggtccgcgaaggc
gaaggcccggccgccaagtgggcgcgcctggagccctacgacggcttcgccctgtctttc
tcgatcgatttcaagcatcccgccatcgattccaccgccaacacggcagaaatcgacttt
gcgcgggattcctacgtcaagaccatcgcccgcgcgcgcaccttcgggttcgccagcgag
gtcgaggccttgcgttcgatggggctggcgcgcggcggcagcctggacaacgccatcgtc
atggacgaataccgcgtcctcaatgccgacgggctgcgctacgacgacgagttcgtcaaa
cacaagatcctcgacgccatcggcgacttgtatctggccggccggcccctggtggcgcgc
tacgttgcctgcaaatccggccacggcctgaacaacttgctggtgcgtgcgctgttggct
cagcaggattgctgggaattgatcagctacgagtcgcgcgacgccgcgcccgccgccttt
acccgcgactggcagctcgcctga
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