Castellaniella ginsengisoli: ABRZ00_12415
Help
Entry
ABRZ00_12415 CDS
T10938
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cgin Castellaniella ginsengisoli
Pathway
cgin01501
beta-Lactam resistance
cgin01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cgin00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ABRZ00_12415
01503 Cationic antimicrobial peptide (CAMP) resistance
ABRZ00_12415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgin02000
]
ABRZ00_12415
01504 Antimicrobial resistance genes [BR:
cgin01504
]
ABRZ00_12415
Transporters [BR:
cgin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ABRZ00_12415
Antimicrobial resistance genes [BR:
cgin01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ABRZ00_12415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
XDJ55326
UniProt:
A0AB39F758
LinkDB
All DBs
Position
complement(2629913..2633080)
Genome browser
AA seq
1055 aa
AA seq
DB search
MPQFFIERPIFAWVVALAIALAGILAIPNMAVSQYPDVAPPTVNINATYPGASASEVATS
VASVIENELNGAKGLLYYESVSDSNGQAEITVTFAPGTDADLAQVDVQNRLSNATAKLPA
AVTQQGLKVSQSNSGFLMVVTLSSKDGSVDQYALADYITRNIQNPMSRIKGVGKFQLFAA
SRAMRVWVDPQKLVGYGLSMSQVNSALASQNMVISGGLLGSPPNPDSQRTVAPLTVNGQL
TTPEEFGAIVLRANPDGSSVRIRDVARVELGSDNYQFGARLNGKATAAFALSLTPTANAL
ETAELAKAKMAELSKFFPENITYQIPYDTSPYIDLSIEQVVHTLLEAMVLVFVVMFVFLQ
NVRYTLIPALVVPVAMMGAFAVMLALGFSINVLTMFAMVLAIGILVDDAIVVVENVERIM
AEEGLSPKEATKKAMPQISGAIVGITLVLTTVFLPLAFMSGSVGVIYRQFSVAMAVSILF
SAVLALSFTPALCATILKPIPKGHHESKGGFFGWFNRGFDRTTQGYTRWVTRSLKRTLRM
MLVFALLVGVMGWMYLRLPTSFLPEEDQGYVIANIELPSGASSNRTVEIIEQVEKYFMAL
PQVADIIAVQGFSFNGNGLNAAIAFVPLKDFSERKGPGDSAQAISNTAMGRLLFGLPDSM
VVSITPPAISSLGNASGFDLRLEDRSGVGSDALQAATQQLLQLASQSPILTGTRITGLGP
GPQLKVDIDRDKAAALGVDFSEAAQLISTAIGSSYVGKFTNQGWVQNIWVQAEQDARMDP
DDILRLNARNANGEMVPLSSFVTLSWTQGPVQIVRYNGYESIRIGGSAAPGYSTGQAMAE
MERLITQLPPGLGYEWTGLSYQEIQAGSQSAILMGLSILVVFMVLAALYESWAIPLSVML
AVPLGMLGAVLLSSLMGKDNDVYFMVGMVTVIGLAAKNAILIVEFAKDLYASGAGLADSA
IEAARLRFRPILMTSFAFILGVVPLVTASGAGAASQNAVGLGVLGGMLAATPLAVLFVPT
FFVVILKLFKTKPKLLGHQAPHIPAAGESGSGDKA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgccacagtttttcattgaacgaccgatcttcgcctgggtggtggcgctggccatcgcc
ctggccggtatcctggccatccccaacatggccgtgtcgcagtaccccgacgtggcgccg
cctacggtgaacatcaacgccacctatccgggcgcttcggcatccgaggtggccaccagc
gtagccagcgtcatcgaaaacgaactgaacggcgccaagggtctgctgtactacgaatca
gtcagcgactccaacggccaggccgagatcaccgtcaccttcgccccgggcacggatgcc
gacctggcccaggtggacgtgcagaaccggctgtccaacgccaccgccaagctgcccgcg
gccgtgacgcagcagggtttgaaggtcagccagtcgaattccggcttcttgatggtggtc
acgctgtcgtccaaggacggctccgtcgatcagtacgccctggccgattacatcacgcgc
aacatccagaacccgatgtcgcggatcaagggcgtgggcaagttccagctttttgccgcc
agccgcgccatgcgcgtctgggtcgatccgcagaaactggtcggctacggcctgagcatg
tcccaggtgaacagtgccctggcatcgcagaacatggtcatttccggtggcctgctgggc
tcgccgccgaatccggattcgcagcgcaccgtggcgccgctcaccgtcaacggccagctc
accacgccggaagagttcggcgccatcgtgctgcgggccaacccggatggctcctcggtg
cgcatccgcgacgtcgcccgggtcgaactcggctcggacaactatcaattcggcgcgcgc
ctgaacggcaaggccacggcggccttcgccctgtcattgactcccacggccaacgccctc
gaaaccgcagagctggccaaggccaagatggctgaactgtccaagttctttcccgagaac
atcacttatcagattccctacgatacgtcgccctacatcgacctttcgatcgagcaggtg
gtccacacgctgctcgaagcgatggtgttggtgttcgtggtgatgttcgtgttcctgcag
aacgtgcgctacaccctgatccccgcgctggtggtgccggtggcgatgatgggggctttc
gcggtgatgctggccctgggcttctccatcaatgtgctgaccatgttcgccatggtgctg
gctatcgggattctggtggacgatgccatcgtggtggtggaaaacgtcgagcgcatcatg
gcggaagagggcctgtcccccaaggaagccaccaagaaagccatgccgcagatcagcggg
gccatcgtcgggatcacgctggtgctcacgacggtgttcctgccgctggccttcatgtcc
ggctcggtgggggtgatctaccgccagttctccgtggccatggcggtgtccatcctgttt
tccgccgtgctggcgctcagtttcaccccggcgttgtgcgctacgattctcaagcccatt
cccaaggggcaccatgaatccaaaggcgggtttttcggctggttcaaccgcggcttcgat
cgcaccacgcaaggctacacccgctgggtcacgcgcagcctgaagcgcactttgcgcatg
atgctggtcttcgccctgctggtgggcgtgatgggttggatgtacctgcgtctgcccacc
tctttcctgcccgaggaagaccagggctatgtgattgccaacatcgagctgccctcaggc
gcttcgtcgaaccgcacggtggaaatcatcgagcaggtcgaaaaatacttcatggcgctg
ccgcaggtggccgacatcatcgccgtccagggctttagcttcaatggcaacggcctgaac
gccgccatcgctttcgtgcccctgaaggatttctccgaacgcaaggggccgggcgattcg
gcccaggcgatatccaacaccgccatggggcgcttgctgttcgggttgcccgattccatg
gtggtgtccatcacgccgccggcgatctcctcgctgggcaatgcctcgggctttgacctg
cgcctggaagaccgcagcggcgtaggcagcgatgccttgcaggccgccacgcagcaattg
ctgcaactggcttcgcaaagccccatcctgaccgggacgcgcattaccggcctcgggccg
gggccccagctcaaggtggacatcgaccgtgacaaagccgccgccctgggcgtggatttc
tccgaggccgcccaactgatttccacggcgatcggctcgtcctacgtcggcaagttcacc
aatcagggctgggtgcagaacatctgggtgcaggcggagcaggacgcccgcatggatccg
gacgatatcctgcggctcaatgcccgcaatgccaatggcgaaatggtgccgctgtcctcg
ttcgtgaccttgtcctggactcaggggccggtccagatcgtccgctacaacggctacgaa
tcgatccgcatcggcggctcggcggcgccgggctactccaccggccaggccatggccgaa
atggagcgcctgatcactcagttgccgcccggcctgggctacgaatggacgggcctgtcc
taccaggaaatccaggcgggcagccagtccgcgatcctgatgggcttgtcgatcctggtg
gtcttcatggtgctggccgccctttatgaaagctgggccatccccctgtcggtgatgctg
gccgttccgttgggcatgctgggcgccgtgctcctgagcagcctgatgggcaaggacaac
gacgtgtacttcatggtcgggatggtgaccgtgatcggtctggcggccaagaacgccatt
ctgatcgtggaattcgccaaagacctgtacgccagtggcgcgggcctggccgattccgcc
atcgaggccgcgcggctgcgtttccgcccgatcctgatgacgtccttcgctttcatcctg
ggggtggtgcccctggtgaccgccagcggcgcaggcgcggccagccagaacgccgtgggc
ctgggcgtactgggcggcatgctggcggccacgccgctggccgtgctgttcgtgccgact
ttctttgtggtgattctgaaattgttcaagaccaaaccgaaactgctgggccatcaagcg
ccgcatatccccgccgcaggcgaatccggctcgggagacaaggcatga
DBGET
integrated database retrieval system
