Corynebacterium glutamicum ATCC 21831: AR0_06720
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Entry
AR0_06720 CDS
T03361
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cgj
Corynebacterium glutamicum ATCC 21831
Pathway
cgj03030
DNA replication
cgj03410
Base excision repair
cgj03420
Nucleotide excision repair
cgj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AR0_06720
03410 Base excision repair
AR0_06720
03420 Nucleotide excision repair
AR0_06720
03430 Mismatch repair
AR0_06720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgj03032
]
AR0_06720
03400 DNA repair and recombination proteins [BR:
cgj03400
]
AR0_06720
Enzymes [BR:
cgj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AR0_06720
DNA replication proteins [BR:
cgj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AR0_06720
DNA repair and recombination proteins [BR:
cgj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AR0_06720
NER (nucleotide excision repair)
GGR (global genome repair) factors
AR0_06720
MMR (mismatch excision repair)
DNA ligase
AR0_06720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AR0_06720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AIK87714
LinkDB
All DBs
Position
1393433..1395475
Genome browser
AA seq
680 aa
AA seq
DB search
MTEDNAQLRRTWNDLAEKVRYHRDRYYNEQPEIPDADFDALFKQLQQLEEDHPELAVPDS
PTMVVGAPVAEQSSFDNVEHLERMLSLDNVFDEQELRDWLGRTPAKQYLTELKIDGLSID
LVYRNGQLERAATRGDGRVGEDITANARVIEDIPHQLQGTDEYPVPAVLEIRGEVFITVE
DFPEVNAQRIADGGKPFANPRNAAAGSLRQKNIEDVKKRRLRMISHGIGFTEGFSPASQH
DAYLALAAWGLPTSPYTEAVTDPEDVLKKVSYWADHRHDALHEMDGLVIKVDDIASQRAL
GSTSRAPRWAIAYKYPPEEVTTKLLDIQVGVGRTGRVTPFAVMEPVLVAGSTVSMATLHN
QSEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVELRDGTEREYIFPTLCPECGTRLAPAKA
DDVDWRCPNMQSCPGQLSTRLTYLAGRGAFDIEALGEKGAEDLIRTGILLDESGLFDLTE
DDLLSSNVYTTNAGKVNASGKKLLDNLQKSKQTDLWRVLVALSIRHVGPTAARALAGRYH
SIQALIDAPLEELSETDGVGTIIAQSFKDWFEVDWHKAIVDKWAAAGVTMEEEVGEVAEQ
TLEGLTIVVTGGLEGFTRDSVKEAIISRGGKASGSVSKKTDYVVVGENAGSKATKAEELG
LRILDEAGFVRLLNTGSADE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaagataatgctcaactgcgtagaacgtggaacgacttagccgagaaggttcgt
tatcaccgagatcgttattacaacgaacagccagagatccctgatgctgattttgatgcg
ctttttaagcagcttcagcagttggaagaagaccacccggagctcgccgtccctgatagc
cccaccatggttgtgggcgctccggtggcagagcaatcaagctttgacaatgttgagcac
ttggagcgaatgctcagcttggacaatgtttttgatgagcaggagttgcgtgattggttg
ggcaggacgccagccaagcagtatttgacggagttgaaaattgatggcttgtccatcgac
ttggtgtatcgcaatggccagttagagcgtgccgcaactcgtggtgatggtcgcgtgggc
gaggacatcacggccaatgctcgcgtgatcgaagatatcccgcaccagcttcagggcact
gatgaatatcctgtgcctgctgtgctggaaattcgcggtgaggtgttcatcactgtggag
gatttcccagaggtcaacgcgcagcgcattgctgatggtggcaagccgtttgccaacccg
cgtaatgctgcggctggttctctgcgtcagaaaaatattgaggacgtgaagaagcgtcgc
ctgcggatgatcagccatggcatcggtttcactgaaggctttagccctgcgtctcagcat
gatgcgtatctggcattggctgcctggggtttgcccacctcgccgtacacagaggctgtg
actgatccagaagatgtgctgaaaaaggtcagctactgggctgatcaccgccacgacgca
ctccatgagatggatggcctggtgattaaggtcgatgacatcgcatctcagcgtgctttg
ggttccaccagccgcgcgcctcgctgggccattgcgtataagtaccctccggaggaggtc
accaccaagctgcttgatattcaggttggcgttggtcgcaccggccgtgtcaccccattc
gcggtcatggagcctgttcttgttgcaggatcaacggtgtctatggcgacgctgcataac
cagagcgaagtcaagcgtaaaggcgtgctcatcggtgacaccgtggttatccgcaaggcg
ggcgaggttatcccagaggtgcttggccctgtcgtagagcttcgtgacggcacagagcgc
gagtacatcttcccaacgctgtgccctgaatgcggtacccgtctggcgcccgcgaaggcc
gatgacgtggattggcgttgccccaacatgcaaagctgtccaggtcagctgtccacgcgt
ttgacctaccttgctggtcgtggcgcttttgatattgaagcattgggcgaaaagggcgct
gaagacctcatccgcaccggcattttgcttgacgagtctggcctgttcgacctcacagag
gacgatctgctgagctccaatgtctacaccaccaacgccggcaaagtaaatgccagcggc
aagaaactgctggacaacctgcaaaaatccaagcagaccgacctctggcgagtcctcgtg
gcactatctatcaggcacgtaggccccaccgcagcgcgcgcccttgcaggtcgctaccac
tccatccaggcgcttatcgacgcccccctcgaggaactctccgaaaccgatggagtaggt
accatcattgcccaatccttcaaggactggttcgaggttgattggcacaaggccatcgtg
gacaagtgggcagccgctggtgtgactatggaggaagaagtaggggaggtcgctgaacaa
acccttgaaggcctaaccatcgtggtcaccggagggttggaaggcttcaccagagattcg
gtgaaggaagccatcatctcccgtggcggaaaagcctctggatctgtctcgaagaaaact
gactacgtggtggttggtgaaaacgcaggttccaaggccaccaaggcagaagaactaggg
ctgcgcattctggatgaggcaggattcgtccgtttgctaaataccggctcagctgacgaa
tag
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integrated database retrieval system
