Corynebacterium geronticis: CGERO_10015
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Entry
CGERO_10015 CDS
T06788
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cgk
Corynebacterium geronticis
Pathway
cgk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGERO_10015 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgk03400
]
CGERO_10015 (pdg)
Enzymes [BR:
cgk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CGERO_10015 (pdg)
DNA repair and recombination proteins [BR:
cgk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGERO_10015 (pdg)
Prokaryotic type
CGERO_10015 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AZA12289
UniProt:
A0A3G6J2X0
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All DBs
Position
complement(2101971..2102729)
Genome browser
AA seq
252 aa
AA seq
DB search
MPTTRPRSTNSQLARTRRARKFNRLLTEAYPDAHCELNFNNPLELTVATILSAQCTDARV
NTVTPAIFARYPEAHDYASANEAELQELIHSTGFYKAKARNIIAMAQQLVSEHHGEVPED
FDALISLPGVGRKTAHCVRGNAFGYPGLTVDTHFGRLVRRWELTNSEDPVKVEHEIAAML
PKEEWTMFSHRLVFHGRRVCHARKPACGACLLKNHCPSFGIGPSDALAAELLKGPNTEHL
LELAGLNTAEEA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacgcccccgcagcacgaattcgcaacttgcccgcacccgacgtgcccgc
aagttcaaccgactgctcaccgaggcgtatcccgatgctcattgcgagctcaacttcaac
aatccgcttgaacttaccgtcgccacgatcctatcggcgcaatgcacagacgcccgcgtt
aataccgtgacacccgcgatcttcgcccgctaccccgaggcgcatgattacgccagtgcc
aacgaagccgaactacaagagctcatccattccaccggcttctataaagccaaggcgcgc
aacatcatcgccatggcacaacaactcgttagcgaacaccacggggaagtgccggaagat
ttcgacgcgctgatttcccttccgggtgtgggacgcaaaaccgcacactgcgtgcgcggt
aatgccttcggttaccccggtctcaccgtagacacgcactttggcagactggttcgccgc
tgggagctcacaaactcagaagacccggtgaaggtagaacacgaaatcgcggccatgctg
cccaaagaagaatggacgatgttctcgcaccgcctggtatttcatggcaggcgcgtatgt
cacgcacgcaaaccggcgtgtggggcttgcctgctcaagaaccactgcccgagcttcggc
attgggccaagcgacgcgctcgcggccgaattgctcaaaggaccaaacaccgagcactta
cttgaacttgccgggctgaacacagcagaggaagcataa
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