Chryseobacterium gallinarum: OK18_12900 Help Entry OK18_12900        CDS       T03954                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cgn  Chryseobacterium gallinarum Pathway cgn03030   DNA replication cgn03410   Base excision repair cgn03420   Nucleotide excision repair cgn03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cgn00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     OK18_12900    03410 Base excision repair     OK18_12900    03420 Nucleotide excision repair     OK18_12900    03430 Mismatch repair     OK18_12900  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cgn03032]     OK18_12900    03400 DNA repair and recombination proteins [BR:cgn03400]     OK18_12900 Enzymes [BR:cgn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      OK18_12900 DNA replication proteins [BR:cgn03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      OK18_12900 DNA repair and recombination proteins [BR:cgn03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      OK18_12900    NER (nucleotide excision repair)     GGR (global genome repair) factors      OK18_12900    MMR (mismatch excision repair)     DNA ligase      OK18_12900   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       OK18_12900 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH RNA_lig_T4_1 BRCT_2 DUF7575 Zn_ribbon_3 zf-IS66 A2L_zn_ribbon Motif Other DBs NCBI-ProteinID:  AKK73385 UniProt:  A0A0G3M436 LinkDB All DBs Position complement(2857600..2859606) Genome browser AA seq 668 aa AA seqDB search MSENIQQKIEQLRKELHQHNENYYLLDTPTISDYEFDMLLQELQDLEAKHPEFYDENSPT MRVGGGITKVFPTIQHKFRMYSLDNSYDFDDLEDWEKRIIKTIEGPVEFVAELKYDGASI SILYENGKLTQAVTRGDGFQGDEITPNVRTISDIPLTLKGDFPSHFFMRGEIYLTRKNFD KINKLREEDGLDPFMNPRNTASGSLKMQDSAEVRKRGLSSVLYQFISDETPADSHWELLQ KAHSWGFKTSQQAKLCRTLDEVKEFITFWDTERHTLPFEIDGIVLKVNSLQQQRQLGYTA KSPRWAMAYKFKAEKVETELQSVSYQVGRTGAITPVANLKPVLLAGTIVKRASLHNEDII KKLDLHEHDFVYVEKGGEIIPKIVGVNTEKRTEESKEIEYIKHCPECGTELVKIEDQAIH FCPNELHCPPQVVGRMIHYVSRKALNIENLGSETIEQLYRERLIENPADFYVLTKEQLLP LERMAEKSAQNIITGIEKSKEIPFEKVLYGIGIKHVGETVAKKLVKNFPTIDELKAATIE ELCQVEDIGAKIAVSIVDFFSNPENILMIERLKSYGVQLEKGESTNEVLSNVLEGKTFLF TGKLSLFTREAAEEMVEKHGGKNISAVSKNLNYLVVGEKAGSKLKKAQDIGTIEILDEQQ FLDLIEKK NT seq 2007 nt NT seq  +upstreamnt  +downstreamnt atgtctgaaaacattcaacaaaagatagaacagcttcgtaaagagcttcaccagcacaat gaaaactattatcttctggatacgcctaccatctctgattatgagtttgatatgcttctg caggaacttcaggacctggaagccaagcacccggaattttatgatgaaaactcccctaca atgcgtgtgggtggtggaatcacaaaggttttccctaccattcagcataaattcagaatg tattccctcgataattcatatgattttgatgatctggaagactgggaaaagagaatcatc aagaccattgaaggtccggtagagtttgttgctgaactaaaatatgacggagcttctatt tccattctttatgaaaacggaaaactgacgcaggcggttacccgcggcgacggttttcag ggagatgaaatcactcctaatgtccgtaccatttcggatattcctttgactttaaaaggt gattttccttctcatttttttatgcgtggagaaatttacctgaccagaaagaattttgac aaaatcaataaactccgggaagaggatggattagatccttttatgaatcccagaaataca gccagcggaagtttaaaaatgcaggacagtgctgaggtaagaaaacgtggtttatcttct gtgctctatcagtttatctctgacgaaactccggcagactcccactgggagctgcttcag aaagcccatagctggggcttcaaaacctcccagcaggccaagttatgcagaacccttgat gaagtgaaggagtttattactttctgggatacggaacggcatacccttccttttgaaatc gatggaattgttttaaaagttaattctttacagcagcaaagacagcttggatatacggct aagtctccccgttgggcaatggcttataaattcaaagcagaaaaggtagaaacagaactt caaagtgtttcttaccaggtagggcgaacaggagctattactccggtagccaatcttaaa ccggtcttgcttgccggaaccattgtcaaaagggcttcccttcacaatgaagatattatc aaaaaactggatcttcacgaacatgattttgtatatgtagaaaaaggcggtgagattatt cctaaaattgttggagtcaatacagaaaaaagaacggaagaaagcaaggaaatagaatat attaaacattgtcccgaatgtggtacagagctggtaaaaattgaagaccaggcgatccac ttctgccctaatgaacttcattgcccaccacaggtagtaggaagaatgatccattatgtt tccagaaaggctttaaatattgaaaatctgggaagcgaaaccatcgagcagctttacagg gaaagattaattgaaaatccagccgacttttatgttttaacaaaagagcagcttcttcca ttggaaagaatggctgaaaagtctgcccagaacatcatcaccggaatagaaaaatccaaa gaaattccgtttgaaaaagtattatacggaatcgggattaaacatgtaggggaaaccgtt gccaaaaaactggtgaaaaacttccctactattgatgaactaaaggctgctactatagaa gagctttgccaggtagaagacatcggggctaaaattgccgtgagtattgttgacttcttt agcaatccggaaaacatcctgatgattgagcgcctgaaatcttatggggtacagcttgaa aagggagaaagcaccaatgaggtattgtctaatgtactggaaggaaagactttccttttc accgggaaattatccctgttcaccagagaggctgccgaggaaatggtagaaaaacatggc gggaaaaatatttctgccgtatctaaaaacctcaactatcttgtagtaggtgaaaaagca ggtagcaagctgaaaaaggcccaggatatcggaactattgaaattctggatgaacaacaa ttcctggatctgattgagaaaaagtaa

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