Cottoperca gobio: 115008292
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Entry
115008292 CDS
T07513
Symbol
iars
Name
(RefSeq) LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cgob
Cottoperca gobio
Pathway
cgob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115008292 (iars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgob01007
]
115008292 (iars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgob03016
]
115008292 (iars)
Enzymes [BR:
cgob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
115008292 (iars)
Amino acid related enzymes [BR:
cgob01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115008292 (iars)
Transfer RNA biogenesis [BR:
cgob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115008292 (iars)
Prokaryotic type
Other AARSs
115008292 (iars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
115008292
NCBI-ProteinID:
XP_029287663
Ensembl:
ENSCGOG00000018490
UniProt:
A0A6J2PND1
LinkDB
All DBs
Position
5:13022117..13076362
Genome browser
AA seq
1268 aa
AA seq
DB search
MVERVPESINFPSEEEKILQFWLKKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDVVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RGIVMRYSNEWETSVRRMGRWIDFDNDYKTLYPWFMETVWWVFKQLYNKGLVYRGVKVMP
FSTACNTPLSNFEAHQNYKDVQDPSVIVTFPLVGNEDVALIAWTTTPWTLPSNLALCVNA
EFLYVKVKDNATEKTYILMEARLGALFKSESEYTLLDKFPGKTLKGKKYKPLFEYFAECG
EKGAFQVVTDNYVKEEEGTGVVHQAPYFGADDFRVCTDYKIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKWLKEKGRLINASSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLDNNSKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVVC
VGSIAELEELTGVKVTDLHRESIDSLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQAHY
PFENKKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLVVQQYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDEIQFLYNENTAKQSNNIMDKWVLSFTQSLIQFFKAEMEAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPASVEEKDSSSIHYLMLPQVRESVIDKRIESAVCQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALKDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHMV
LGKRLKGAFKAITASIKELNNEQLEIFQKTGSIKVDGHDLHEEDLRLMYTFDQSSGSAAQ
YEAHSDTQVLVLLDVSPDQSMVDEGVAREVINRIQKLRKKGHLVPSDEITVYYGCQPEGE
YLGSVIQAHTDFILATTKAPMLPFPVPKTASVIIEEKTQLKGSDLELTIVKGSSAPRAPL
NGPACTYVNVRVKVNNKEQEGVVLLENPKGDNRQDLNLLKKVCSSIFGINNTQLRFFNGG
TELTCKMDLQALSGKTLSVTSGSSSPGPAPTTDTLLCPYVNLLLCNAQPAECQTGEMGTL
LLVNPVGQNGLNYSGLLSEAAKVFGLRSRRLKLYLDQDLTQELPADSSVKSLDTKTLFVR
VLPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcgagtccctgagtccatcaactttccctctgaggaggagaagatcctgcag
ttctggctaaaaaaggactgcttccaggaatgcctcaaacagtccaagaaccggcctaag
tacaccttctatgatggccctccctttgccacggggctaccccactatgggcacatcctg
gccggcaccatcaaggacgttgttactcgcttcgcccaccagagtggcttccatgtggac
cggcgctttggctgggactgtcacggcctgcctgtggagtatgagattgataagacttta
gggatcaaagggcctgaagatgtggccaagatgggcattgctgagtacaacaagcagtgc
agaggcatcgtcatgagatactccaacgagtgggagacttcagtgaggcgaatgggaagg
tggattgacttcgacaacgactacaagactctctacccatggttcatggagactgtctgg
tgggtgttcaaacagctgtacaataagggtctcgtttaccgaggagtcaaagtcatgcct
ttctccactgcctgcaacacccccctgtccaactttgaggcccaccagaactacaaggac
gttcaggacccatcagtgatcgtcaccttcccattggttgggaatgaggatgtggctttg
atcgcctggacgaccacaccctggaccctgccaagcaacctggccctctgtgttaacgcg
gagttcttgtatgtcaaggtcaaagataacgccacagagaagacctacattttgatggag
gcccggctgggagctctgttcaagtctgagagcgagtacactctcctggacaaatttccc
ggcaagacgctgaaagggaaaaaatacaagcctctttttgagtactttgccgagtgtggg
gagaaaggagcgttccaggtggtgacggataactacgtcaaggaggaagagggcacagga
gtagtccaccaggcaccttactttggagctgatgattttagggtgtgcaccgactacaag
atcatccagagggaccaggctcctatctgccctgtggacgcctcgggctgcttcacttca
gaggtcactgactttgcgggacagtatgtcaaagatgctgacaagaatatcatcaagtgg
ctgaaggaaaagggtcgtctcatcaatgccagcagtttcaaacatagttaccccttctgc
tggaggtctgacacacccctgatctacaaagccgtccccagctggtttgttcgagtggag
cacatggtggacaaactactggacaacaacagcaaatgctactgggttccagagtttgtg
cgcgagaagcgtttcgggaactggctgagagacgcacgagactgggcgatttccagaaac
cgctactggggcacgccgatccctctctgggtcagcgacgactttgaggaggtggtgtgt
gtagggtctattgctgaactggaggaactgaccggagtcaaagtaactgatctgcatcgg
gagagcattgacagtctgaccatcccgtcccggtgtggtaagggcgtgctgcggagggtc
acagaggtgtttgactgctggtttgagagcggcagcatgccttacgcccaggcccactac
ccctttgaaaacaagaaggagtttgaggacactttccctgcagacttcatcgccgaaggc
attgaccagacgaggggatggttctacaccttgttggtgctctccacagcgctgttcggc
aaaccgcccttcaagaatgtcattgttaacggcttggtactcgcgagcgatggacagaag
atgagcaagcgcaagaagaactacccagatccaggactggtagtgcagcaatatggagct
gatgccctcagattgtacctcatcaactctcctgtagtgagagcagagaatctgcgtttc
aaagaggaaggtgtgcgagacgtgttgaaggatgtcttcctgccgtggtataatgcctat
cgcttcctggtgcagaacgtacagcggttacagaaggaggatgagattcagttcctgtac
aatgaaaacacggcaaagcagagtaacaacatcatggacaaatgggtcctgtccttcaca
cagtccctcatccagttcttcaaagcagagatggaggcttaccgcctgtacaccgtcgtg
cctcgcctggtaaagtttgtggacatgctcaccaactggtatgtgaggaccaacagacgc
cgactgaagggagagagtggcactgaggactgcctgtgggcgctggaaaccctcttcagt
gttctgttctccatgtgcaggcttatggctcccttcacaccattcattacagagatgatg
taccaaaacctgcgtcacctcatcgaccccgcctctgtcgaagagaaggacagcagcagc
atacactatctcatgctgccccaagtcagggagagtgtgattgacaagcgcattgagagt
gccgtctgtcagatgcagtctgtgattgaactgggccgagtgatccgagacaggaagacc
ctgcccgttaagtacccattaaaggaggtggtggtaattcaccaggacccagaggctctg
aaagacatccagtccctgcagaaatacatcctggaagagcttaatgtgcgacaattgaca
ctgtcaacagacaaggacaagtacggtatccgtctgagagccgagccagaccacatggtg
ctgggcaagagactgaagggcgccttcaaagctatcactgcttctatcaaggagctcaac
aacgaacagctagagatcttccagaagacaggatccatcaaggtggacggccatgacctt
catgaggaggacctgaggctcatgtacaccttcgaccagagctctggctccgcagcacag
tatgaagcacactctgatacacaggtcctggtgctgctggatgtctccccggaccagtcc
atggtggatgaaggcgttgcccgagaggtcatcaaccgcattcagaaactacgcaagaag
ggtcatctggtgccatcagatgaaataactgtgtactacggctgccagccggagggggag
tacttgggctctgtgatccaggctcacaccgactttatcctggcgaccaccaaggctcca
atgttgcccttccctgtccctaaaactgccagcgtcatcatagaagaaaagactcagctt
aagggctcagacttggagttaaccatagtgaagggctcttcagcccctcgggctcctcta
aatggaccagcttgcacctatgtgaacgtcagggtgaaggtcaacaacaaagaacaagag
ggggtagtgctgttggagaaccccaaaggggataacagacaagacttgaacctgctgaag
aaagtgtgcagcagcatctttggaatcaacaacacccagctcagattcttcaatggcggg
actgagttgacatgtaaaatggaccttcaggctttgagcggtaaaaccttgtcagtgact
tcaggctcttcctcccccggccctgcccccaccaccgacaccctcctctgtccttacgtt
aacctgctgctttgcaacgcacaaccagctgagtgccagacaggagagatgggcaccctc
ctgctggtgaacccagtgggccagaatgggctcaactactctggcctgctgtctgaggct
gccaaggttttcggcctccgcagcagacggctcaaactctacctggaccaggacctcacc
caggagctgccagctgattcatcagtaaaatctctcgacaccaaaactctgtttgtgaga
gttcttcctacaactgccgaagcataa
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integrated database retrieval system
