Cottoperca gobio: 115010233
Help
Entry
115010233 CDS
T07513
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115010233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115010233
Enzymes [BR:
cgob01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
115010233
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115010233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
115010233
NCBI-ProteinID:
XP_029290603
Ensembl:
ENSCGOG00000006696
UniProt:
A0A6J2PWV5
LinkDB
All DBs
Position
6:23550684..23556365
Genome browser
AA seq
468 aa
AA seq
DB search
MEDKLNGFPVVSPEYLQQWVQSAQQFQALQAQYSGFNHNHQSHYPEGQTEEPAMAHMAYP
EHMMDQQEPANLAKPPAKKRGRQAQPKEPKAPKPPKVPKAPKAPKAPKAPKAPKPPKAPK
PPKDPNAPKAKPGPKPKKATEAQADGKQEKIDESFKKVKRKIDRFKGMSEEEVMTKTLPD
LLEYNLDYVIIGINPGLMAAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHTHDTTLPLKYK
MGFTNMVARATPGSKDLSTKELREGGKILVEKLIKFKPLIAVFNGKCIYEMFCREMFGKK
PKKLDFGLQPHKIPDCDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLNGLQKST
EVEEVDYSFDLKLAKESAKNAAIKEEQYDPGYEDAYGGVYAERGPDGEPTQTQTNGHCTF
STAENTEGAQEATTSQIPDGQLPDGQWMTQSFADQIPDISGAPKDGSV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagctgaatggattccctgttgtctccccggagtatcttcaacagtgggtt
cagtctgcacagcagtttcaagctctccaggcacaatattcaggcttcaaccacaaccat
cagtctcactaccccgagggacagacagaagagccagccatggctcacatggcttatccg
gaacacatgatggatcagcaggaaccggccaacctcgcaaaacctccagccaaaaagaga
ggcagacaagctcaacccaaggaacccaaggcacccaaaccaccaaaagtccccaaggca
ccaaaagcaccaaaagcaccaaaagcaccgaaggcaccgaagccaccaaaagcacctaaa
ccacctaaggacccaaatgcacctaaagccaaacctggccctaagcccaagaaggccact
gaggctcaggcagatggaaagcaggagaagattgatgagagcttcaagaaggtgaaaagg
aaaatcgaccgcttcaagggaatgtcagaagaggaagtcatgacaaagactctgccagac
ctgctggaatacaacctggactatgtcattattggtattaatccaggactgatggcagct
ttcattggacggtggtttccaggtcctggaaatcatttttggaagtgcctgtttctgtct
ggattcactgaggagcagctgaaccacacgcacgacaccaccctgcctctcaagtacaaa
atgggcttcaccaacatggtggccagggcgacaccaggaagcaaagacctctcaactaaa
gagttgcgcgaaggaggaaagattctcgtagagaagctgattaagttcaagcctctcatc
gctgtttttaatggaaaatgcatctatgaaatgttctgcagagagatgtttggtaagaaa
ccaaagaagcttgattttggtttgcagccacacaagatccccgactgtgacgtggctctg
tatctgatgccgtcatccagcgcccgttgtgctcagttccctcgtgcgcaggacaaagtc
cacttctacatcaaactgagggagctcagagatcagctgaacggtctccaaaaaagcaca
gaggtcgaggaggtcgactactcgtttgacctgaagttggctaaggagtcggccaagaat
gcagcgataaaggaggagcagtacgatcccggttatgaagatgcctacggtggagtgtat
gcagagagaggacctgacggggaaccgacccaaacccagaccaacggtcactgcacattc
tcaactgcagaaaacacagaaggagcgcaggaggcgaccacgtcacaaataccagacggc
cagctccccgacggacagtggatgacccagtcctttgcagatcagatcccggacatcagc
ggtgcaccaaaggacggcagcgtataa
DBGET
integrated database retrieval system
