KEGG   Cottoperca gobio: 115012294
Entry
115012294         CDS       T07513                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cgob  Cottoperca gobio
Pathway
cgob03420  Nucleotide excision repair
cgob04110  Cell cycle
cgob04114  Oocyte meiosis
cgob04120  Ubiquitin mediated proteolysis
cgob04141  Protein processing in endoplasmic reticulum
cgob04310  Wnt signaling pathway
cgob04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115012294 (rbx1)
   04120 Ubiquitin mediated proteolysis
    115012294 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115012294 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    115012294 (rbx1)
   04350 TGF-beta signaling pathway
    115012294 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    115012294 (rbx1)
   04114 Oocyte meiosis
    115012294 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgob04121]
    115012294 (rbx1)
   03400 DNA repair and recombination proteins [BR:cgob03400]
    115012294 (rbx1)
Enzymes [BR:cgob01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     115012294 (rbx1)
Ubiquitin system [BR:cgob04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   115012294 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     115012294 (rbx1)
   Cul2 complex
     115012294 (rbx1)
   Cul3 complex
     115012294 (rbx1)
   Cul4 complex
     115012294 (rbx1)
   Cul7 complex
     115012294 (rbx1)
   Cul8 complex
     115012294 (rbx1)
   Cul9 complex
     115012294 (rbx1)
DNA repair and recombination proteins [BR:cgob03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115012294 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115012294 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 115012294
NCBI-ProteinID: XP_029293703
Ensembl: ENSCGOG00000008684
UniProt: A0A6J2Q5J8
LinkDB
Position
8:complement(16091755..16094806)
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacgccgagcggcacgaacagtggagctagcaagaag
cgatttgaagttaagaagtggaatgccgtggcgctgtgggcctgggacattgtggtggat
aactgtgccatctgtcgaaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacctctgaggagtgcactgtagcctggggtgtctgcaatcatgccttccat
ttccactgtatttcccgctggctgaaaaccagacaggtgtgtcctctggacaacagggag
tgggagtttcagaaatacggacactag

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