Cottoperca gobio: 115012655
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Entry
115012655 CDS
T07513
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cgob
Cottoperca gobio
Pathway
cgob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115012655 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115012655 (eftud2)
Spliceosome [BR:
cgob03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
115012655 (eftud2)
Complex C
U5 SnRNP specific factors
115012655 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
115012655
NCBI-ProteinID:
XP_029294235
Ensembl:
ENSCGOG00000021983
UniProt:
A0A6J2Q9Z6
LinkDB
All DBs
Position
8:4550603..4562335
Genome browser
AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSEDDEDDLNAEDRDVDERDDDDDDEPADADEEVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNRQFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRLSDGIVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIGELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSMYSICFTLGSFAKIYSETYGDINYNEFAKRLWGDIYFNPKTHKFSKKAP
NSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHVPSPQEGARNKIEHTYTGGLDSDLGEAMTECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRSLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctgtatgacgagtttggaaactacatcggtccagagctggactctgaa
gatgatgaagatgatctgaatgcagaagacagagatgttgacgagagggatgatgatgat
gatgacgagcctgctgatgctgatgaggaagtcccagggatggaggttgtgctgcatgag
gacaagaagtactatcctacggcagaggaggtttatgggcccgaagtggaaactattgtc
caagaggaagacacgcaacctctcacagagcccatcatcaagcctgtgaagaacaggcag
ttcaccctgatggagcaggagttacctgccactgtgtatgatatggagttccttgcagat
ctgatggatggtccggagctgatccgtaacgtgaccctgtgtggtcaccttcaccacggc
aagacctgttttgtggactgcctgattgaacagacgcatccagaaatcaggaagagagat
gatgtggatctccgatacacagacatcctctttacagaacaggagagaggagttggtatc
aagagcacaccggtcacgatggtactgccagactccagaggcaaatcctaccttttcaac
atcatggacacaccaggccacgtgaacttctctgacgaggtcacgtccagcatccggctc
tccgacggtattgtcctcttcatagacgcagcggaaggagtgatgctgaacacagagcgc
ctgataaaacatgcggtgcaggagcgtatggccatcaccatctgcatcaacaaggtggac
cggctcattggggagctcaaactgcctcccacagatgcttattataaactgcgccacatt
gttgatgaggtcaatggtttgctcagtacgtactccacggatgagaacctggtggtgtct
cctctccttggaaacgtgtgctttgccagctccatgtacagcatctgcttcactctgggg
tcctttgcaaagatctactcagaaacctacggtgacatcaactataatgagtttgcgaag
aggctttggggagacatttattttaaccccaaaacccacaagttctcaaagaaagctccc
aacagtaactctcagcgcagctttgtggaatttgtcctggagcctctctacaagatcctc
tcacaggtggtgggggacgtggacacttctctccccagagttctggacgagctggggatc
cacctgactaaggaggagctgaagctgaacatcagacccctgctgaggctggtctgtaac
cgcttctttggagagttcactggttttgtggacatgtgtgtacagcacgtcccctcgcca
caggagggtgccaggaacaagatagagcacacgtacactggaggtctggactcagacctg
ggggaggccatgacggagtgcgaccctgatggtcctttgatgtgccacaccactaagatg
tacagcacagaggatggggttcagttccatgcgttcggcagagtgctgagtgggaccatt
caagcgggtcagcccgtcaaggttttaggcgagaactacaccctggaagacgaggaggac
tcccaggtgtgcactgtgggccgtctctggatctcagttgccagataccaaattgaagtg
aaccgagtgcctgctggcaactgggttctcatcgaaggttgtgaccagccaatcgtcaag
accgccacaatcacagagcccagagggaacgaggaggctcagatcttcaggtctctgaag
ttcaacacagcatcggttataaagattgcagtggagcccgttaacccatcagagctacca
aaaatgttggacggactgaggaaggtcaacaagagctatccgtcgctcaccacaaaggtg
gaggagtctggagagcatgttatcttagggacaggagagctctacctggactgtgtcatg
cacgacctgcgcaagatgtactctgagatcgacattaaagttgccgaccctgttgtgact
ttctgtgagacggtcgtggagacatcgtcactcaagtgcttcgctgaaacgccaaacaaa
aagaataagatcaccatgattgctgagcccttggagaagggtctggctgaggacatagag
aacgaagtggtgcagatcacgtggaacaggaagaagctgggagagtttttccagacgaag
tacgactgggatcttctggctgccaggtccatctgggccttcggaccagacactacggga
ccaaacatccttgtagacgacacgctgccctctgaggtggacaaggcgctgctcggctca
gtcaaagacagcatcgttcagggcttccagtggggcaccagggaggggcctctgtgtgac
gagcccatcaggaatgtcaagtttaagatccttgacgcagtcattgctcaggagcctctc
caccgaggagggggccaggtcatccccacagccaggagagtggtgtactccgctttcctc
atggccactccacggttgatggagccatattactttgtggaggttcaggctccagctgat
tgtgtgtctgccgtttacacagtgctggctcggagaaggggtcatgtcacccaggatgca
cctatcccagggtctcctctctacaccattaaggctttcatcccggccatcgactccttc
ggctttgagaccgaccttcgcacacatacacagggacaggctttcgctctctctgtgttc
caccactggcagatcgtccccggtgacccgttagacaagagtattgtgatcaggcccctt
gagcctcagcctgctcctcacctggccagagagttcatgatcaagacccgaaggcgcaag
ggtcttagcgaggatgtgagcatcagcaagttcttcgacgatcctatgttgttggagctg
gccaaacaggacgtggtgctcaactaccccatgtga
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