Cottoperca gobio: 115014563
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Entry
115014563 CDS
T07513
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115014563 (kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115014563 (kdm2a)
04121 Ubiquitin system [BR:
cgob04121
]
115014563 (kdm2a)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115014563 (kdm2a)
Enzymes [BR:
cgob01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
115014563 (kdm2a)
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
115014563 (kdm2a)
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115014563 (kdm2a)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
115014563 (kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
115014563 (kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
SR-25
LRR_6
Cupin_8
C1_1
Cupin_1
Motif
Other DBs
NCBI-GeneID:
115014563
NCBI-ProteinID:
XP_029297395
Ensembl:
ENSCGOG00000005116
UniProt:
A0A6J2QIX6
LinkDB
All DBs
Position
10:complement(11620670..11634457)
Genome browser
AA seq
1327 aa
AA seq
DB search
MEDPHTRYSKRLRTGTRRRYQDDGISDDEIEGKRMFDLDEKLQCVRFNSELIKHMEGKDF
TFEYIQREGLREPIIFETADGLGIQMPDSDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLE
MYENWVLSGKQGDIFLGDKCFDCQRIELKQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVLERYLYCQTNISHLTPEFKKYSLGIG
LTQADLETNDHTKNGTSNGGDGDTENKEIKEEEVKEQEQEEAAKDATPQHMLTPFELEGL
WNLLGKLEELPDQKKCVPVGIMNATALLEDMRTLLKEHANDNPKLSYTGEPIVKWPERPS
WYQPPTPPPPVIYRPRLGPTLHKPQRSTKRSSISAMRRKRVRCKRCAACCRKECGTCQFC
HDMRKFGGPGRMKKGCLMRRCLAPALPNTARCAICGEGESDESNPSTHSLMECSVCSQIV
HRQCNKEPGEGKINKDLPSCWECPKCYQGKDSASESTSDEESGESEGSSSLPPIKRAYRE
GIGVGEGVRRGGRSQSSSRPTAPPPSQKLLLQHQQNRKRANALELRLKKRIKLERSKILT
KQSSLDRSPRPLRSKVLSGLRSPTSRLSQGRGRSSSWASGSTYHSSPGGTESFQQQQQQQ
QQQQQQQQQQQQSSLGLVLEPKGEPRSGRGRGVRLRGGGAGRGLRGGKSHEELKEDSEDS
SSSSSSNSSSSSSSSSSSSSSSGSSDEEEERGQNSGRGLDKENQPQSRRGERAAKEREEE
ASEVANQNGAEEDEEEEMEQDSETGGIDGSNLKVTLQKPTRAKRDPSAIVPKLEAIAPPT
ATSTIHNQTRVLARPPIRNHGPCPDQHSSRHTRVHTRSRHTDTRTSHAERLEDSKKTRPA
KLSNGASSSSTSELPHLRIPLSALQEGGSEADRENGGSGPGCEREVWVSVFRYLSRADLC
VCMAVCKNWYKWCLDKRLWARIDLSIKRTVTPQALTGIIKRQPVTLDLSWTNISKKQLNW
LVGRLPGLKDLMVAGCSWLSISALCSSSCPLLRSLDLRYADGVKDSQIRNLVTPPGCDNR
SQLRTMQCLRLAGLDISDSTLRLVIRHMPHLTKLDLSHCNSLTDNSINLLTAVGSSTRNT
LTELNLGGCSKLTDTCLKYLRRLSCISLLDLRGCKVVSRKACEAFISELSVNTLYCLSDE
KLIQRIS
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccctcatacacggtacagcaaacgcctgcgtacagggacgcggcgccgctac
caggacgatggaatctcagatgatgaaattgaagggaaacgaatgttcgacctggacgag
aagttgcagtgcgtcaggtttaactctgaattgatcaaacacatggagggtaaagatttc
acatttgagtacatccagagggaagggctcagggagcccattatctttgagacagctgat
ggccttggcatacaaatgccagactctgacttcagtgtgagtgatgtcaagttgtttgtt
ggtagtcgacgcattgtagatgtgatggacgtgaacactcagaagggaatagagatgtcg
atggctcagtggcgacgctactatgagacgccgccatcagaaagagagaaactctacaac
gtcatcagtctggagttcagccacaccaggctggagaatctggtcaaacgaccggcttcg
gtggaccttattgactgggtggacaacatgtggccccgccatctcaaggagagacagaga
gactccacaaatgccatcatagatatgcattatcccaaagtacagaagtactgtctcatg
agtgtgcagggctgcttcacagatttccacattgactttggaggcacttcagtctggtac
cacatcctccgaggaggaaaggtgttctggctgattccacccacaccacagaacctggag
atgtacgagaactgggttttatcaggaaaacagggagacatcttcttgggcgacaagtgt
tttgactgccagaggatagagctcaagcaaggcaacaccttcataatcccttcagggtgg
atccatgccgtgtacaccccagaggacacgttggtgtttggggggaatttcctccacagc
tttaacatccccatgcagctcaacatctacagcattgaggatcgcacacgggtgccagca
aagttccgctatccgttctactatgagatgtgctggtatgtcctcgagagatacctctac
tgtcagaccaacatctcccacctcactcctgagttcaaaaaatactccctaggcatagga
ctgacccaggctgaccttgaaaccaacgaccacaccaagaatggcacctccaatggaggt
gacggtgacactgaaaacaaggagatcaaggaagaagaagtcaaagaacaagaacaagaa
gaggcagctaaagatgccacacctcaacacatgctgactccctttgagctggagggactg
tggaaccttttagggaagctggaggagctgccagaccagaaaaagtgtgtccctgtaggc
atcatgaacgccacagccctgctcgaagacatgaggactcttctgaaggagcatgccaat
gataatcccaaactgtcctacactggagagcccattgtcaagtggcccgaaaggccatca
tggtaccagccccccactccccctccccctgtaatttaccggcctcggttgggccccacc
ctccacaagcctcagcgatccaccaaacgctcctccatctctgctatgaggcgcaaacgg
gtgaggtgcaagcgctgtgcagcctgctgcaggaaggaatgcggcacctgccagttttgc
cacgacatgaggaagtttggtgggccgggtcgcatgaagaagggctgcctcatgagacgg
tgtctagcgcctgccttaccgaacacagcgcgatgtgccatatgtggagaaggagaatcg
gatgaatcaaatccgagcactcactcactcatggagtgctctgtgtgctcgcagattgtc
catcgtcaatgcaataaggaacctggtgaggggaagatcaataaggatttgcccagctgc
tgggaatgtcccaaatgttaccaaggaaaagactccgcatcagagtctaccagcgatgag
gaaagtggagagtcggagggctcatcgtccctgccaccgatcaaacgcgcctaccgggaa
ggcattggtgtaggtgaaggggtgagacgagggggacgtagccaatcatcatcccgaccc
acagcaccaccaccttctcagaaactgctactgcagcatcaacagaaccgcaaaagagca
aatgcactggagctcagacttaaaaagaggataaaactagagcgcagcaaaatcttaacg
aaacagtcgtctctagaccgttctccccggccgctgcgctccaaggtgctgtccgggctg
cgctctccaaccagcaggctatctcagggcagaggccggagctccagctgggcgagtggc
tccacctaccacagctctccaggagggactgagtctttccagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagtcttccctcggtctggtacttgag
cccaagggagagccccgcagtgggagggggagaggggtgaggctgcggggaggaggagca
ggaagaggactcagaggtggtaaaagccatgaagagttgaaggaggacagtgaggacagc
agcagcagcagcagcagcaacagcagcagtagcagcagcagcagcagcagcagtagcagc
agcagcggcagcagcgatgaggaagaggagagagggcagaacagtgggaggggattggat
aaagagaaccagccacagtcaaggcgaggagaacgggcagccaaagagagagaagaggaa
gcgagcgaggtggccaaccaaaacggtgcggaggaggatgaggaggaagagatggagcag
gacagtgaaacagggggcatagacggctcaaatcttaaagtgacactccaaaagccaacc
agggccaagcgggacccatcagccattgtccccaaattggaagctatcgcccctccaact
gccacttccacaatacacaaccagaccagagtcctcgccagacccccaattagaaatcac
ggaccctgtcctgatcaacactccagtaggcacacacgtgtacacactcgcagtagacac
acagacactcggacctcccacgcagagaggctggaagactctaaaaaaacgagaccggct
aaactgagcaatggcgcttcctcttcttcaacctctgagcttccccatctccgtatccct
ctgtccgccctgcaggaaggagggagcgaggcagacagggagaacggcggcagcgggcca
ggctgtgagagggaggtgtgggtatctgtcttccgttacttaagtcgagcagatctctgc
gtctgcatggctgtctgcaagaactggtacaaatggtgtttagacaagcggctttgggca
cggatcgacctgagcatcaaacgcaccgttacacctcaggccctaacaggcatcataaag
agacagccggtcacactcgatctctcttggaccaacatctctaaaaaacagctcaactgg
cttgttggccgcctgcctgggctgaaggatctcatggtggcaggttgttcctggttatct
atttcagctctctgctcctctagttgccctctcctccgttctctggacctgcggtatgca
gacggagtcaaagactctcagatcaggaatctagtcactcctcccggttgtgacaatcgc
agtcagttgcgtaccatgcagtgtttgcgactagcaggcctggacatcagcgactccact
ctgcgcctggtgatccgccacatgccccatttaacaaaactggacctctcccactgcaac
agcctcacagacaactccatcaacctgctgactgcagtgggctcgtccacccgaaacact
ctcacagaactcaacctgggaggttgcagtaaactgacagacacgtgtctcaagtatctc
cgccgcctctcttgcatctcactgctcgacctgcgaggctgtaaagtcgtctcccgcaag
gcctgtgaggccttcatctccgagctgtcggtgaacacgctctactgcctgtcagatgaa
aaactgatccagaggatatcctaa
DBGET
integrated database retrieval system
