Cottoperca gobio: 115014733
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Entry
115014733 CDS
T07513
Symbol
pdgfrb
Name
(RefSeq) LOW QUALITY PROTEIN: platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04010
MAPK signaling pathway
cgob04020
Calcium signaling pathway
cgob04510
Focal adhesion
cgob04518
Integrin signaling
cgob04519
Cadherin signaling
cgob04540
Gap junction
cgob04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115014733 (pdgfrb)
04020 Calcium signaling pathway
115014733 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
115014733 (pdgfrb)
04519 Cadherin signaling
115014733 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115014733 (pdgfrb)
04540 Gap junction
115014733 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115014733 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgob01001
]
115014733 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgob04090
]
115014733 (pdgfrb)
Enzymes [BR:
cgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115014733 (pdgfrb)
Protein kinases [BR:
cgob01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115014733 (pdgfrb)
CD molecules [BR:
cgob04090
]
Proteins
115014733 (pdgfrb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
VEGFR1-3_N_Ig-like
ig
V-set
Ig_VEGFR-1-like_5th
C2-set_2
Adeno_E3_CR1
RIFIN
VEGFR-1-like_Ig-like
Beta-prop_CGLA
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
115014733
NCBI-ProteinID:
XP_029297645
UniProt:
A0A6J2QJN7
LinkDB
All DBs
Position
10
Genome browser
AA seq
1101 aa
AA seq
DB search
MRRVTASTFHLTVTVAALLYFCTELRCVEITPDDKELILAEGSSLTLTCSGSGDTTWEFK
REDVPYFQVEQVPNGGPSYQIEQSSVTSSVLTLWNMSWKHTGVYQCIDRHTGETKEVAVF
VPDPDVWFVESIHGMVTKTSDESTVPCVVTNPNINVTLYERDTGLPIMGLYVPSEGFKAP
LEDRTYVCRGELNTEVKVSQDFYVFSVVVPEAIDVYINASNTVLKQGEPLTVNCTVHGVE
LLSFYWDIPNREEVEPQTEIVSTVNLRSCLIFPHATVAHSGNYICDVHEGVKGQTASASV
NITVLERGFVDVKTAHKQNISAKLQENVELRVEIEAYPPPQVRWSKDGATIKGDKPITTR
QEHEIRYVTILTLMRVRTEQKGLYSVLVTNGDDTKKVTFDLEVQVPSQIKDLTDHHLAGN
RHLVTCVAEGVPTPTIQWYSCDSMHKCSNQTAAWQQLVAEPEVLSIRTNVSYSETRKTSQ
VQSQVTFHKPQQVTVRCETSNQAGLLDRRDVKLVSNTLFSQVAVLAAVLALVVIIIISII
ILIAVWRKKPRYEIRWKVIESVSQEGHEYIYVDPIHLPYDLAWEMQRDNLVLGRTLGSGA
FGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGA
CTKQGPLYLVTEYCRYGDLVDYLHRNKHTLLQNYAEKNQDDGCLVSGGSTPVSQRKGYVS
FGSESDGGYMDMSKDEPTIYMPMQEQMDSIKYADIQPSPYESPYQHDFYQEQGDGRLDLA
ISDSSVLTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLIKICDFGLARDI
MHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNE
LFYRALKRGYRMAKPAHASDEVYDIMKKCWDEKFETRPEFSFLVHSVGNMLADSYKKKYC
QVNDNFLKSDHPAVARTKPRLSSPFPIANPAFGSPSPNYLPPDPYNRSPSPGEFRQEADT
QEVITSYNEYIIPIPDPKPEDVFTHGTSESPASSLALEDETDSMSQDTADTLPEEDRLEE
TSERDALLGSSGTPDVEDSFL
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtgacggcatccacgttccatctgacggtcacggttgcagctctcctgtat
ttctgcaccgagctgcgctgtgtggagatcacacccgatgacaaagagctcatcctggct
gaaggctcctctctcaccctcacctgctcaggctcaggggacacgacctgggagttcaag
agggaagatgtgccgtacttccaagtggaacaagttccaaatggtggtccaagctaccaa
attgagcaaagcagcgtcacatccagtgttttgaccttgtggaacatgagctggaagcac
acgggggtgtatcagtgcattgatcgacacactggagaaactaaggaggtggctgttttt
gttccagaccctgatgtgtggttcgtagagagcatccacggcatggtaacaaagaccagt
gacgagagcactgtcccctgtgtggtcaccaatccgaacatcaatgtcaccctgtatgag
agggacactggtctgcccatcatggggctttatgtccctagtgaggggttcaaggcaccg
ctggaggacaggacatatgtgtgtcgtggagagctgaacacagaggtgaaggtgtctcag
gacttctacgtcttcagcgtcgtcgtcccagaggccatcgacgtctacatcaatgcgtca
aacaccgtgttgaagcagggcgaaccactgacagtaaactgcacagtgcacggagtggag
ctcttgtctttttactgggatatccccaacagagaggaggtcgagccgcagacagaaatc
gtgtctaccgtgaacttgcgctcctgcctgatcttccctcatgccacggtggcccacagc
ggcaactacatctgcgatgtccacgagggtgtcaaaggccagactgcctctgccagcgtc
aacatcactgtgctcgagcgaggctttgtggacgtgaagactgctcacaaacaaaacatt
tcagccaagctacaagagaatgtggagctgagagtggagattgaagcctaccctccccct
caggttcgctggagcaaagatggcgccaccatcaagggagacaaacccatcactaccaga
caagagcatgagatcaggtatgtcactattctcaccttgatgagggtaaggactgagcag
aagggactctacagtgtccttgtcacaaatggagatgacacaaagaaagtgacctttgac
ctggaggtccaagttccctctcagattaaagacctgactgaccaccatctcgctgggaac
agacacttggtgacctgtgtagctgagggggtcccaaccccgaccatccagtggtacagc
tgtgacagcatgcacaagtgtagcaaccagacagcggcgtggcagcagctggtagcagag
ccggaggtgctgagcatcaggaccaacgtcagctacagcgagactcgtaaaaccagccag
gtgcagagccaagtgaccttccacaagccccagcaggtcacagtgcgctgtgagaccagc
aaccaagcaggactcctcgacagaagagacgtcaaactggtgtccaacacgctgttctcc
caggtggcagtattggctgctgttttagccttagtggtcattattatcatatccatcatc
atcctcattgcagtatggaggaagaaacctcgctatgagatcagatggaaggtgatagag
tctgtgagccaggaaggtcacgagtacatctatgtggatcccatccacctgccctacgac
ctggcttgggaaatgcagcgagacaacctggtgctggggcgcactcttggatcaggagcc
tttggcagggtggtcgaggcaaccgcgtatggtctcactcattcccagtccagcacaaaa
gtagctgtgaaaatgctgaaatctacggccaggaggagtgagactcaggctctgatgtca
gagttgaagatcatgagtcacctgggtcctcacctcaacattgtgaacttgttgggagct
tgcaccaaacaaggccctctgtatttggtgaccgagtactgtcgctatggcgacctggtg
gactacctgcacaggaacaagcacaccctcctgcagaactacgccgagaagaaccaggac
gacggctgcctcgtctctggaggaagcactccggtcagccagaggaaaggctatgtctcc
tttggaagtgagagtgatggaggatacatggacatgagtaaagatgagcccaccatctac
atgcccatgcaggagcagatggacagcatcaagtatgcagacatccaaccctcgccatac
gagtctccctaccagcatgacttctatcaggaacaaggtgacggcagattggacctggcc
atcagcgactcttctgttctcacctatgatgatctgttgggcttcagctaccaagtggca
aaggggatggagttcctcgcctccaagaattgcgttcatcgtgacctcgctgccaggaat
gtgttgatctgtgaggggaaactgataaagatctgtgacttcggcctggccagagacatc
atgcatgattccaactacatctctaaaggcagcaccttcctgcccctgaagtggatggca
ccagaaagtattttccataatttgtataccaccctgagcgacgtgtggtcttacggcatt
ctcctttgggagattttcacactgggaggaaccccctaccctgatttgcccatgaatgag
ttgttctacagagctttgaagagaggataccgaatggccaaacctgcacacgcctctgat
gaagtttatgacatcatgaagaagtgctgggacgagaagtttgagacgaggcctgagttc
tcatttctggtccacagtgttgggaatatgttggcagacagctataaaaagaaatattgc
caagtcaacgacaacttcctgaagagtgaccacccggcagtcgcccgcaccaaacccagg
ctctcctcaccctttccgatcgccaacccagcattcgggtccccatccccaaactacctc
cccccggacccctacaaccggagcccgagccctggggaatttagacaagaggcagacaca
caggaagtcataacttcatacaacgaatacatcattcccatcccagaccccaagccggag
gatgttttcactcatggcacgtcagaaagccctgcaagctctctggctctggaggacgag
actgactccatgtcgcaggacactgccgacactctcccagaagaggacaggctggaggag
accagcgagagagacgctctgctgggctcctccgggacgcccgatgtagaagacagcttc
ttgtag
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