Cottoperca gobio: 115015026
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Entry
115015026 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-B7-like
KO
K16497
protocadherin gamma subfamily C
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgob04515
]
115015026
Cell adhesion molecules [BR:
cgob04515
]
Cadherins
Protocadherins
115015026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
115015026
NCBI-ProteinID:
XP_029298051
UniProt:
A0A6J2QK91
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Position
10:complement(12687025..12700172)
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AA seq
958 aa
AA seq
DB search
MSLHSVKASDKDSGNNARISYFLEDSQLNGMSASAYFSVNAESGEILAVRSFDYEQTKEF
HIRVKAQDGGSPPLSSNVTVKILIQDQNDNPPQVLYPVQTGGSLVAEMVPRSADVGYLVT
KVVAVDVDSGQNAWLSYKLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDN
GQPSRSATVIVNVAVADSFPEVLSEFTDFTHDKEYNDNLTFYLVLALAVVSFLFITYVGG
TGTMKQAISYEVYGTTDSRMSDIKCPRPFNAQTRYSIPEELKQGSVVGNLAKDLGLVVSE
LYRRKLRITSEAGKQYFNVDLGKGELVVIDRIDREELCGQRPSCLLPLELVIDNPLQLHR
VEIEILDTNDNSPSFLTNEKVLKIAELANPGTRFLLESAQDPDVGHNSVRSYLISKNDHF
KLTVKNHKDGRKIPELVLEKPLDREKLPVHNLILTAVDGGDPVRSGTSEITVIVLDNNDN
APQFEKQVYEANVSEKATPGTEILHVKATDSDEGLNGEIKYLFAEQTTYLILSLFDIEPS
TGVIIVKGMLDHETNPLLRFDITAKDKGNPEMDGHCGVEIKIVDINDNIPEIIVTSLTTP
VPEDSAVGTVIALISAKDPDSGNNGKITLSVSSKSPFKLNPSVSNHYSLVTNGPLDRETN
NQYSVKISATDAGKPPLSSEKIILVELLDVNDNPPVFSHPSYVVYVKENHAPGKILCSVS
ATDPDSGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAK
DQGSPSLSSNTTVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRTAKAGHLVTKVTAVD
ADSGHNAWISYKLAEATDTSLFTVNLYTGEVRTKRAASEQDDSSQRLLIEIKDDGEPVQS
ATVTVSILMEDGLHEPILDLRHKVAEPKQENWENHPLFDSLSGLGVRVISGDFSHLSG
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccactctgttaaagccagtgacaaagactctggaaacaatgcgcgcatttcc
tacttccttgaggacagccaactgaatgggatgtcagcctccgcttatttttcagtgaat
gcagagagtggagagatacttgcagtgcgttccttcgactatgagcaaacaaaagagttc
catattcgcgtcaaagcgcaggatggaggatcccctccactcagtagcaatgtgacagtt
aaaatactgatccaggaccagaacgacaaccctcctcaggttctgtacccagtccagact
ggtggctctctggtggcggaaatggtgcctcgttcagcagatgtgggctatctggtcact
aaagtggtggctgttgatgtggactctggacagaatgcctggctctcctataaactgcag
aaagccacagacagggcgctgtttgaagtgggcttacagaatggagaaataagaactatc
cgccaagtgactgataaagatgctgtgaaacaaagactgactgttatagtggaggacaac
gggcagccctctcgttcagctacagtcattgttaacgtggcggtggcggacagcttccct
gaagtgctgtctgagttcactgactttacacacgacaaggagtacaatgataacctgacc
ttttacttagtgctggctctggctgtagtctccttcctcttcatcacgtacgtaggaggt
accggtacgatgaagcaggcaatcagttacgaggtgtacggaactactgattcccggatg
agtgatatcaagtgtccccgacccttcaacgcacagacacgctacagcatcccggaggaa
ctgaaacagggctctgtggtaggaaatctagccaaagatttgggtttggttgtatctgaa
ctgtaccgacgtaaattgcggataacctcggaagctggtaagcagtattttaatgtggac
ttggggaagggagaactggtggtgattgataggatagatagggaggaactgtgtggacaa
agaccgtcatgtttgttgccattggaactcgtcatagataacccgctacagctgcataga
gtggaaattgaaatattggatacaaacgacaattctcctagttttcttactaatgaaaaa
gtgttaaaaattgcagagctggccaatccaggcacgcgttttctgttagagagtgcacag
gatcccgacgttggccataattctgtacgctcttacctcataagcaaaaatgatcatttc
aaattgactgttaaaaaccataaggacggtagaaaaatccctgaattggtcctcgaaaaa
cctcttgatcgagaaaagctgcctgtacacaatcttattctcaccgctgtagatggggga
gatccggtgcgttcagggacatctgaaattacggttatagtacttgacaacaatgataat
gccccgcagtttgaaaaacaggtatatgaggctaatgtcagcgaaaaggcaacacccgga
actgaaatattgcatgttaaagctacagattcagacgaaggactaaatggagaaatcaaa
tatttgtttgcagaacaaactacatatctgattttatcattatttgacattgaaccttct
actggagtaattattgtcaaaggaatgttagaccatgaaacaaaccctttacttagattt
gacataactgctaaagacaaaggtaatcctgagatggatgggcattgtggcgtcgaaatt
aaaatagttgacattaacgacaatattcctgaaattattgtgacgtctttaacaacacct
gttccagaagactctgccgttggaacagttattgcgttgataagtgcaaaagacccagat
tctggtaacaatggtaagattaccttaagcgtgtcttccaaatccccctttaagttaaat
ccttcggtctctaaccattactcattagtaacaaatgggccacttgaccgtgaaacaaat
aaccagtatagtgtcaagataagtgctactgatgctggaaagccccctctatcgagtgaa
aaaataatacttgttgaattgctagatgtaaatgacaacccaccagttttctcacatcct
tcttatgtcgtttatgtaaaagagaatcatgctcctgggaagattttgtgctcagtgtca
gcaactgatccggattctggtgacaacgcgaaaatatcctactccatcttggactctaaa
gtgcaggacgtctctgtctcctcgtatgtttacattaactcagataacggcagcatctac
agcatgcactcgtttgactatgagaaactgaaagtgtttcagattcaggttcaggcaaag
gatcagggctctccgtctctcagcagcaacaccactgtccatgttttcatcctggaccag
aacgacaatgcccccgctgttatttacccctcctccgctgccctgggctccctctctcat
cagaggatgccccgaactgctaaagcgggtcacctggttactaaggtgacggccgtggac
gctgactcgggccataacgcctggatctcctacaaactggcggaggccaccgacacctct
ctgttcactgtcaatctgtacacaggggaggtgaggactaaacgcgctgcgtccgagcag
gacgactcctctcagaggctgcttatagagatcaaggacgacggggaaccggtccagtcc
gccaccgtcacggtgtccatcctgatggaggacggcctccatgagcccatcttagacctc
cgacataaagtagccgagcccaagcaggaaaactgggagaatcaccctttatttgattct
ctctctggcctcggtgtccgtgttatctctggtgacttttctcatcttagcggttaa
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