Cottoperca gobio: 115016852
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Entry
115016852 CDS
T07513
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04010
MAPK signaling pathway
cgob04137
Mitophagy - animal
cgob04141
Protein processing in endoplasmic reticulum
cgob04210
Apoptosis
cgob04217
Necroptosis
cgob04621
NOD-like receptor signaling pathway
cgob04622
RIG-I-like receptor signaling pathway
cgob04920
Adipocytokine signaling pathway
cgob05132
Salmonella infection
cgob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115016852
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115016852
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115016852
09143 Cell growth and death
04210 Apoptosis
115016852
04217 Necroptosis
115016852
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115016852
04622 RIG-I-like receptor signaling pathway
115016852
09152 Endocrine system
04920 Adipocytokine signaling pathway
115016852
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115016852
09171 Infectious disease: bacterial
05132 Salmonella infection
115016852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115016852
04121 Ubiquitin system [BR:
cgob04121
]
115016852
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115016852
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115016852
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
115016852
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
ATG16
At3g49055
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
115016852
NCBI-ProteinID:
XP_029300782
Ensembl:
ENSCGOG00000019782
UniProt:
A0A6J2QU75
LinkDB
All DBs
Position
12:18537948..18543945
Genome browser
AA seq
605 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNM
TVSIMFFYCSNGPQKCSACIKEDIFEDPTSLLKQGCAFPDNAVRREVENLSAICIHENCT
WKGSIKEYELSHEGKCDFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFK
NIKAHDEICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIH
DHERTYAYEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLVELQHSLRELEARVSQLSTT
SSGPPVQGAAAAASSSSSSSGPPGPPASAPLLPPPTLAPTLSVSTSFTPLPSSVGAALEL
QLHSEKTKVVELGRRCTELEVKSGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEA
LSNKVRQLERTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAM
FSPAFYTSKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLD
QSNREHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIV
DLTGL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggagccgtcccctccctcgtccatggagagcaataaacccggcttcccc
aagaagatcctgggcaacaagctggaggacaaacacctgtgcaactgctgccacaacata
ctcagacgaccgtttcaagcccagtgtggacatcgcttctgttcctactgcttcaacatg
actgtcagtataatgtttttttattgcagtaatggaccccagaaatgcagtgcctgtatt
aaagaggatatctttgaggatcctacatcgcttttgaaacaaggatgtgcttttcctgac
aacgcagttcgaagagaagttgaaaacctttcagcgatttgtatccatgaaaattgcact
tggaaaggcagcattaaagagtatgagctgagccacgagggaaagtgtgacttcatgatc
atcccctgcccttcctgtaaagaacgaattcgcttcaatgaacaggagcgccataatgag
cgagagtgcccggagagaacactcaactgcaagtactgcaaggagccatttcacttcaaa
aacatcaaggcacatgatgagatctgtcccaagtacccgatgatctgtgaaggctgtgcc
aagaagaaaatacccagagaaaagtatgtggatcacattaagttctgcagcaaattcaga
actccgtgtcgatttcatgtcgtgggatgtgatatgtctgtggaaaaggaaaagattcat
gaccatgagcgcacctatgcctacgagcacctcaatctgttgctgcactacattatgggc
atgaaagtgagcatggagggcctgcagccccagggattggaagtagccggacataaactg
gtggaattgcaacattccctcagggagcttgaggccagagtctctcagcttagcaccacc
tcctctgggcctcccgtgcagggagccgccgccgccgcctcctcctcatcctccagctcc
ggcccccccggtccacccgcttcagctcctctccttccacctcccaccctggctcccact
ctgtctgtgtctacctccttcacgcccctgcccagctcggtgggtgcggcgctggagctc
cagctccacagcgagaagaccaaagtggtggagctgggtcgcaggtgtacggagctcgaa
gttaaatccggcacgtttgaaaatgtggtgtgtgtcctgaacagagaggtggagcggttt
gccaccaccatggaagccagcaaccgtcagcacaaactggaccaggacaagatcgaggct
ctgagtaacaaggtgcgacagctggagaggacagtggggctgaaggacttaacggtggct
gagatggagggccgactgagggaaatgtcagccacaacctttgatggcgtctttgtctgg
aggatctctgattttgccaaaaagagacaggatgccatcgcaggtcgagcccctgccatg
ttttcaccagccttctataccagtaagtacggctataagatgtgtctgcggatctatctg
aatggagatgggacagggcgtggcagccacttgtccttgttctttgtggtgatgagggga
ctgagcgacgctctgctcaaatggcctttcaaccagaaggtaactctgatgctgctggac
cagagcaacagggagcacatcatcgacgcctttcgacccgatgtcacgtcatcttccttc
cagcgaccggtgagcgagatgaacatcgccagcggctgtccgctcttctgcccgctctcc
aagctcgatgccaagaactcatacatccgcgacgacaccatcttcatcaaggcgatcgtg
gacctcaccggcctctag
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