Cottoperca gobio: 115018621
Help
Entry
115018621 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM37-like
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115018621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115018621
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115018621
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115018621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
zf-C3HC4_2
MRFAP1
HlyD_2
BORCS6
Motif
Other DBs
NCBI-GeneID:
115018621
NCBI-ProteinID:
XP_029303576
UniProt:
A0A6J2R0F4
LinkDB
All DBs
Position
14:complement(21874015..21886554)
Genome browser
AA seq
945 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLTKHEDNDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLVEIYEQHVTKVKDEVAKLRRRLMELISLVQEVERNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLHSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLVNFSTLRQRADPVYSPP
LQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYIS
QMESAQSGYIQQINNLKERLAIELFRRQTSRSSSPPDLRLSAGTTASERDPRSVKSDDDI
QTTLTNVKKGEEEERTQHDDSNELSDGDLEVDCLTEEEVNPLDGSSTSGSSTATSNTEEN
DIDEETMSGENDVDFIGNLETEEGELPDDLVGAAGGSSCSLRSLHRSAGRSGSSSGAVAG
GAGSNSLLEIDPVILIQLLDLKERSVESLWGLQPRPPVSLLHSQAHTHSRKDRERRPQVV
RRSAPDSGVLIRLKAQMAEVRSKMSDVKSQVLEARGNGEPRPGSSGGFSVEEVTSHHADS
EMSACRKPGELDLLGRAAAARSRPCRPARKSLSPVLDSSSSLVMKTSPEEMEKELRGADV
ATELSLHLKEGLGGVEGALKADYTQGPLVSLGSSSSEQASTSKQQYSVVEQLYGASGARD
EIFSLGGPSYMTASKNCGSRTLGAAMLDCESESSGNSHHSLLEGPSAQLQSNEDKSPSVL
VAATSSDSDSEDEALQSNNSHYDNQTPPCPGEQLLSDDLSLPADR
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaaagtgtcgagagcatcgccgaggtgttccgctgcttcatctgcatggag
aaactgagggatgctcgtctctgcccacactgctccaaactctgctgcttcagctgcata
cggcggtggctgaccgagcagagggcccagtgtccacactgtcgggctccgctccagctg
agggagctggtcaactgtcgctgggcagaggaggtcacccagcagctggacaccctgcag
ctctgcaacctcacaaagcatgaggacaacgacaaggacaaatgtgagaaccaccatgag
aagctgagtgttttctgctggacctgtaagaagtgcatctgtcaccagtgtgctctgtgg
gggggcatgcatggcggccacaccttcaagcctctggtggagatctacgagcagcacgtg
accaaagtgaaggatgaggtcgccaagctccgccgccgcctcatggagctcatcagtctg
gtgcaggaagtggagaggaacgtggaggctgtcaggggagcgaaggacgagagggtcaga
gaaatccgaaacgctgtggaaatgatgatcgctcgtctggacaaccagctcaagaacaaa
ctcatcaccctcatgggccagaagacgtccttgacccaggagacggagctgctggagtct
ctcctgcaggaggtggagcatcagcttcactcctgcagtaagagtgaactgatctccaag
agtccagagatcctgctcatgttccagcaggtccatcggaaacccatgcagtccttcgtc
accacgccggtccctccggacttcaccagtgagctggtccccgcctacgactccagcact
tttgttctggtcaacttcagcaccttgaggcagcgtgctgacccggtctacagccctcct
ctccagatatccgggctctgctggagactcaaagtctacccagacggtaacggggtggtc
cgtggaaactacctgtctgtgttcttggagctgtcagctggtctccctgaaacatcaaag
tacgagtaccgtgtggagatggtccatcaggcctccagtgacccgaccaagaacatcatt
cgggagtttgcctcggactttgaggtcggtgaatgctggggctacaaccgcttcttcaga
ctggatcttctggccagcgagggctacctgaacatgcagacggacacactggtcctccgc
taccaggttcgctcgcccaccttcttccagaagtgcagagatcagtactggtacatcagc
cagatggagtcggcccagagcggctacatccagcagatcaacaacctcaaagagaggttg
gccatcgagctgtttcgccgtcagacgtcgcgcagctcctctccccccgacctgaggctc
tctgcaggcaccacggcgtctgaaagagaccctcgctcagtgaagagcgacgacgacatc
cagaccactttgaccaacgttaaaaaaggcgaagaagaagagaggacgcagcacgatgac
tctaacgagctgtcggacggtgacctggaggtggactgtctgaccgaggaggaggtgaac
ccgctggatggcagcagcacctcggggagctccacggccaccagcaacacggaggagaac
gacatcgatgaggagaccatgtcgggggagaatgatgtagacttcattgggaatctggag
acagaagaaggagaacttcctgatgacttggttggagcagcaggtggatccagctgcagc
ctgcggtccttacatcgcagtgccggtcgtagtggcagcagcagtggagctgtggcgggt
ggtgctggcagtaacagcctcctggagatcgacccggtgatcctgatccagctgctggac
ctgaaggagcgcagcgtggagtctctgtggggcctccagcctcggcctcctgtgtctctg
ctgcacagccaagctcacactcactccaggaaagaccgagagcggcggcctcaggtggtg
cggcgatcggctccagactcgggggtcctgatccgcctcaaggctcagatggctgaggtc
cgcagcaagatgtctgacgtcaagagtcaagtgctggaggctcgggggaacggagagccc
aggcctggctcctcagggggcttcagtgtggaggaggtaacctctcaccacgccgattca
gagatgtcagcttgtcgtaagcccggcgagctggacctgctggggagagcagctgcggct
cggtccaggccctgccgccctgccaggaaatctctgtctcctgtcctggacagcagcagc
tctctggtgatgaagacgagtccagaggagatggagaaggagctgcgaggagctgacgta
gccacagagctcagcctgcatcttaaagaggggctgggaggtgtagagggagcgctgaag
gctgactacacccagggccccctcgtgtctctcggcagctcctcgtcagagcaggcctcc
acctccaagcagcagtactcggtggtggagcagctgtacggggcctcgggggccagggac
gaaatcttctccttgggaggaccaagctacatgactgccagcaagaactgtggcagtagg
accctcggggcggccatgttggactgtgaatctgaaagctcaggaaactcccatcactcc
ctgctggagggcccctccgcacagctgcagtcgaatgaagataagtctccgtctgtgctg
gtggcagcaacaagcagcgacagcgactctgaggacgaagcgctgcagagcaacaactct
cactacgacaaccagactcctccctgcccaggagagcagcttctgtctgatgacttgagt
cttcctgctgacaggtga
DBGET
integrated database retrieval system
