Cottoperca gobio: 115019808
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Entry
115019808 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: slit homolog 1 protein-like
KO
K06838
slit 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115019808
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Axon guidance molecules
115019808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
hEGF
LRRNT
LRR_9
LRR_1
EGF_TEN
LRRCT
LRR_14
LRR_EndoS
LRR_NXF1-5
EGF_DL_JAG
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
115019808
NCBI-ProteinID:
XP_029305285
Ensembl:
ENSCGOG00000012624
UniProt:
A0A6J2R7F5
LinkDB
All DBs
Position
15:13287850..13369851
Genome browser
AA seq
1536 aa
AA seq
DB search
MPVRGSCFGAGMGKLAGQSLWMWVVMLSALLMGNASACPALCTCSGTTVDCHGLGLKTMP
RNIPRNTERLELNGNNLTRITKSDFAGLKYIRVLQLMENQITVIERGAFDDMKELERLRL
NRNQLQQLPELLFQKNPALSRLDLSENIVQSIPRKAFRGATDIKNLQLDKNHISCIEDGA
FRALRGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLSWLAQWLRQRPTI
GLFTQCTVPTELRGLNVAEVQKHEFSCSGHQESASPQPCSIGGGSCPAMCTCSNNIVDCR
GKGLTAIPANLPDTMAEIRLEQNGIKSVPPGAFSPYKKLRRIDLSNNQISEIALDAFQGL
RSLNSLVLYGNKITDLPKGVFDGLYALQLLLLNANKIHCVRANAFQDLQNLSLLSLYDNK
IQTLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRLANKR
IGQIKSKKFRCSAKEQYFIPGTEDTRLNNACNSDPVCPPKCRCESNVVDCSNLKLTKIPE
HIPSSTSELRLNNNEITALEATGVFKSLSQLKKINLSNNKITEIEDGSFEGASSVNELHL
TANQIDSVRSGMFRGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLTTITPGA
FDTLQTLSTLNLLANSFNCDCRLGWLGDWLRTRKIVTGNPRCQRPAFLKEIPLQDVALPD
FRCEEGQEEVSSCVPRPQCPSECTCMETVVRCSNKHLHTLPKGIPRNVTELYLDGNQFSV
LPKELSTFKYLQLVDLSNNKINSLTNSSFANMSQLTTLILSYNSLRCIPKMAFSGLRSLR
LLSLHGNEISELPDGIFSDVASLSHLAIGANPLHCDCRLRWLSDWVKTSYKEPGIARCAG
PLGMEGKLLLTTPAKKFECTGDVDTTVMVKCNPCLSSPCLNQGICHSDMAEIYRCSCPPG
FKGKNCETALNACVSNPCANGGTCQVNEDKEGEYSCTCPLGFEGPICQTNIDDCEYNDCE
NAATCLDGVNNYTCFCPPYYTGEMCEEMEDVCVPGRSPCQHQSTCLITSAGPKCVCSPGY
VGDDCSVDYNDCEEHRCQNGAQCVDELNGYSCVCPEGYNGQLCEVPPSPLSLCELADCQN
NAPCVERGGRALCQCPPEFGGPRCEKLVSVNFIDRDSYLLLSDLKNWPQANITLQVSTAE
DNGILLYNGEDDHIAVELYQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTFDQMV
NLSIDGGLPTTMDSFGAVRPLNGEAPLYVGGMPVDVHSGAFRLWQLQNGSSFHGCIQNLY
INNELQDFTKTQMKPGVVPGCEPCKKIYCVHGICQPDGAQGPVCHCQPGWSGQQCNEPVI
NPCQGSKCVHGKCIPLDTQSYRCECVEGYRGALCNQQGELFNPCRRLSCKHGRCQISDTG
DSYCHCESGYTGELCDAESECRGEPVRDFYQVQRGYAICQTTRMVSWVECSGACDTGACC
ASQRMKRRKYTFECSDGTSFSEEVEKTIKCGCVGCM
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcagaggtagctgttttggggcaggcatgggcaagctggccggccaatcactc
tggatgtgggtggtgatgctctctgctctgctcatgggcaatgccagtgcatgcccagcc
ctatgtacctgcagtggcaccacagtagactgccatggactgggtctcaaaaccatgcca
aggaatatcccccgcaacactgaaagactggagctgaatgggaataacctcacacgcatc
accaagagtgacttcgctggactcaagtacatccgagttctgcagctgatggagaatcag
attactgtgatcgagcgtggggcgtttgatgacatgaaggagctggagagactgcggctg
aaccgtaatcaactgcagcagcttcctgagttgctgtttcagaagaaccctgccctgtct
cgactagatctgagcgagaacattgtccagtccatccccagaaaagcattcagaggagca
acagacatcaaaaaccttcagctggataaaaaccacatcagctgcatcgaggatggagcc
ttcagagctctgagaggcttggaagtgctaacgctgaacaacaacaacatcagcagtatc
ccagtctccagcttcaaccacatgcccaagctacgaaccttccgtcttcactccaacaat
ctgaactgtgactgtcatctgtcatggttggcccagtggctcagacagaggcctacaatt
ggtctattcacccagtgtactgtccctactgagctcagaggactcaatgtggcagaggta
cagaagcacgaattcagctgctcaggtcaccaggagtctgccagccctcagccgtgcagc
atcggtggaggctcttgccccgccatgtgtacctgcagcaacaacatcgtggactgtaga
gggaaaggtctcaccgccatcccagccaacttgcccgacaccatggctgagatacgtctg
gagcagaatgggattaagtctgttcctcccggagccttctctccctacaagaaactgcgt
aggatagacttgagcaacaaccagatctcagagatagctcttgatgccttccagggcctg
cgctccctcaactccctcgtgctgtatggaaataagatcaccgacctgcccaagggggtg
tttgacggcctctacgctctgcaactgctgttgctgaatgccaataagattcactgtgtt
cgtgccaacgccttccaggacctgcagaatctctcgctgctatcactctacgacaataag
atccaaaccctcgccaagggcaccttcacttcactacgagctatacagacccttcacctg
gcacagaacccatttatttgtgactgtaatctgaagtggctggcagactacctgcgctcc
aaccccatcgagaccagcggcgcccgctgtgccagccctcgccgactcgcaaacaaacgt
attggacagatcaagagcaagaagttccgctgctctgccaaagagcagtacttcatccca
ggtacagaggacacccgcctgaataatgcctgtaacagtgatccagtgtgtcctcccaag
tgccgctgcgagtcgaacgtagtggactgctccaacctgaagctcaccaagatccctgag
cacatcccttcatccacctctgaactccgtcttaacaacaatgagatcaccgctctggag
gcaacgggagtttttaaaagcctttcccagctgaagaaaattaacctcagcaacaacaaa
atcacagagattgaagatgggtcatttgaaggtgcgtcatccgtcaatgagcttcacctc
acagccaatcagatcgactcggtccgaagcgggatgttccgtggccttgaggggctgcgt
atgctgatgctgaggaacaacaagatcagctgtgtccataacgacagtttcactgggttg
cacaacgtccgccttctgtctctgtacgacaaccagctgaccacaatcactcctggagcc
ttcgacactctgcagactctctccacccttaacctcttggccaactccttcaactgtgac
tgccggctgggctggctcggcgattggctgaggactaggaagattgtgaccggtaaccct
cgctgccagcgtcctgccttcctgaaggagatccctttgcaggatgtggctctgcctgac
ttccgctgtgaagagggccaagaagaggtgtcaagctgtgtgcccagacctcaatgtccc
agtgaatgtacttgcatggagactgtggtgcgctgtagtaacaagcacctccacacactg
cccaaaggcatccccagaaacgtgactgaactgtatctggatggaaaccagtttagtgtt
ttgccaaaggaactgtctacgttcaaatacctacagctggttgacctgagcaacaacaag
atcaactctctgaccaactcgtccttcgctaacatgagccaactcaccactctaatcctg
agctacaactcattgcgttgtatccccaaaatggccttcagtggactgcgctctctcaga
ctgctgtctctccatggcaacgagatctcagagcttcctgatggcatcttcagcgatgtc
gcctcactgtcacacttggcaattggtgccaacccattgcactgtgactgtcgcctgcgc
tggctatccgactgggtgaagactagctacaaagagccaggcatcgcccgatgtgctggc
ccactgggcatggagggcaaactgctgctcaccacacctgcaaagaagtttgaatgtaca
ggtgatgtggacactacagtgatggtcaagtgtaacccttgtctgtccagtccatgtctg
aaccaaggcatctgtcacagtgacatggcggagatctaccgatgcagctgtcctccagga
ttcaagggcaagaactgtgagacggctctgaacgcctgtgtgagtaacccatgtgccaac
gggggaacctgccaagtgaatgaggataaggagggagaatacagttgcacatgtccactg
ggctttgagggtcccatttgccaaaccaacattgacgactgcgagtacaacgactgtgag
aacgcagccacctgcctcgatggagtcaacaactacacttgtttttgtcccccctactac
acaggggagatgtgcgaagaaatggaggatgtgtgtgtccctggacggagcccctgccaa
catcagtctacctgcctcatcacctccgctggacccaagtgtgtgtgctctcctggttat
gttggtgatgactgcagtgtagactataatgactgtgaggagcatcgttgccagaatgga
gctcagtgtgtggatgagctaaatggatactcctgcgtctgtcctgaaggatacaatggt
cagttgtgtgaggttcccccatctccactgtccctgtgtgagctggccgactgccagaac
aacgccccgtgtgtggagcgaggtgggcgtgccctctgtcagtgtccaccagagtttggg
gggccacgctgcgagaagctggtcagcgtcaacttcattgacagagactcttacctgctg
ctctctgacctcaagaactggccacaagctaacatcaccttacaggtgtcaacagcagag
gataatggcatcctgctgtataatggagaagatgatcatattgctgtggagctctaccaa
ggtcatgtcaaggtcagctatgaccccggcagccagccaggccatgccatctacagtacg
gagactatcaacgacggccagttccacacagtggagctagtgacctttgaccagatggtg
aacctgtccattgacgggggtctccctaccacaatggacagctttggggcggtgcggccc
ctcaacggggaggctccactatacgtggggggcatgccggtggatgtacactcaggtgct
ttccgtctctggcagctccagaacggttccagtttccatggctgtatccagaacctgtac
atcaacaatgagctccaggatttcaccaagacccagatgaagcctggcgtggtaccgggc
tgcgagccctgcaagaagatctactgtgtacacggcatctgccagcctgacggggctcag
ggaccagtgtgccactgccagccaggttggagcggacagcaatgtaacgagcctgttatc
aacccctgccagggcagcaagtgcgtccacggaaagtgcatcccactggacactcagtcg
taccgctgcgagtgcgtggagggttaccgcggtgccctgtgtaaccaacaaggggagctg
ttcaacccctgccgtcgcttgtcctgcaaacacggtcgctgccagatctcagacacagga
gattcctactgtcactgtgaaagtggctacacaggggaactttgtgacgcagagtctgaa
tgccgaggggaacctgtgcgagacttctaccaggttcagcgaggctatgccatctgccag
acgacacgcatggtctcctgggtggagtgctccggagcttgcgacacgggggcctgctgc
gccagccagcgaatgaaacgccggaaatacacctttgaatgcagcgatggaacctccttc
agcgaggaagtggaaaagaccatcaagtgcggctgcgtgggctgcatgtag
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integrated database retrieval system
