Cottoperca gobio: 115020349
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Entry
115020349 CDS
T07513
Symbol
hps6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115020349 (hps6)
Membrane trafficking [BR:
cgob04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
115020349 (hps6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
115020349
NCBI-ProteinID:
XP_029306177
UniProt:
A0A6J2R9P3
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All DBs
Position
15:complement(13086649..13090987)
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AA seq
943 aa
AA seq
DB search
MARLVLEQLSDFGDYTGGKELTEIFKLTNNNELKNSLSNVRLSPDGHHVHVILCKPKLGL
VTFDKYERPHLAQNQKKLDLRLTVPIVDILYLDHNNNNNNSSSRGAAAVAVVYENGKAEF
WRFQESKAGWHLLQTSDLCNSPSARVVSVCACSNLIIWCEERPPSESSPALSSTRNKLRY
CVCRRDFEVEEGAVRLGGVKIALHNNPKFTMVSSGEYVHLLPDMKVKPLLSMSKFFLSWS
PHHDTLTVSTTCKNTPLKRLSAKESDLKRLVTDCLGYLSTLEPPEIYDFSPTACGGLLLL
LSTGWVCLLQKDGTLRKVYKVADNFMVKCGTHTSLCMYQDTLALLIGQNLHLIDVNCGRE
LEKIALKKEGLLYVNRAERCAPHLLSETGLFVVVNRDMDSRDFNSKLKLSGLGAVESIHP
GALLVEAVFEEACKYYQQRSLSSTQLTVDTLKKGGRFQAPISLASILRIYLSTGLKQKGA
EPSQNGGGGCTAGQDKLMGSLEAELKALVSLEEVKESLVRGNVKEVEAVCESLVEKEVAR
LLSTSELNKEALLYLNSIFSLFPCQAWRAAQAALQLHYHEEGSLSSRAPSDVWKTVLSPA
MTPSTPSCLQFTNGGPKHNHTHKGDHIANCNAKPTSTSSPDALPVFELLCHSVFHFQPSW
LPRFLELVQQQQGSAGLGLSLASSSWGYSGGRGGEGGGNNVLLYKRALGVLSRLTPDRDK
RQDMEVELLLVSGRPNAILQALRILMAKQRWERVTQVAQKFCKQSPLLNKEIFTTLLCEV
AQHRDLDPYLELLWALCPEDLTVTTILNLVLKNLPCPNTPPSSSSSSSSFSMSSTTSSTP
APFTDSHSSQLTIGLLKPLLRKVLQRETKPSQRYADILQSPSFPPPAPPRQPAEQPRTAT
VPSTEPSLANNIAPSSLAETPEQQPSTHTAVPRDRVALTTNPV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggctggtgttggagcaactgtcagatttcggggactatactggcggtaaagag
ctgactgagatctttaaactgacgaataacaacgagctcaaaaacagtctgtcaaatgtt
cgcctgagcccagatggacatcatgttcatgtcatcctctgcaagcctaagctcggtctt
gtaacttttgacaagtatgaaagaccccatctggcccagaaccagaagaagctggatttg
cgattgaccgtgccgattgtggatatcttatatttggaccataataataataataataac
agcagcagcagaggcgccgcagctgtggcagtggtttatgagaatggaaaagctgagttt
tggagatttcaggagagcaaagctggatggcatctcctgcaaacatcagatttgtgcaac
agccccagtgcaagagtggtgtctgtgtgtgcctgttccaatcttatcatctggtgtgag
gagaggccgccctcagaaagctcccctgctctcagctccacaaggaataagctgagatac
tgtgtttgcagacgtgacttcgaggtggaggagggggctgtccgcttgggaggagtgaag
atcgccctccacaacaatccaaagttcactatggtcagctcaggtgaatatgtacatctt
cttcctgatatgaaagtgaagccgctgttgagtatgtccaaattctttctttcctggtcc
cctcaccatgacaccctcacagtcagcaccacgtgtaaaaacactcccttgaaaaggctt
tcagctaaagagtctgacttgaagaggttggtgacagactgtttaggatatttatcaact
cttgaaccacctgagatctacgacttctcccccacggcctgtggaggcctgctgctgctg
ctcagcacagggtgggtgtgtcttctgcagaaagatgggacgctgcggaaggtatacaaa
gtggcagacaatttcatggtaaaatgtggcactcacacaagcctctgcatgtaccaggat
accctggcactgctgatagggcaaaacctgcatctgatagacgtgaactgtggcagagag
ctggaaaagatagcactgaagaaagaggggctattgtatgtaaatcgggctgaaagatgt
gcgcctcacctgctctcagaaactggactttttgtcgttgtgaacagggatatggactcc
agagatttcaactctaagctgaagctttctggtctcggtgcagtggagagcattcacccc
ggagccctcctcgtagaggctgtctttgaggaggcctgtaaatactaccagcagaggagc
ctgagcagcactcagctcactgtggacacgctgaagaaaggaggccggttccaggctccc
atctctttagcctccatcctcaggatctacctcagcacagggttgaagcagaaaggagca
gagccgtcccagaatggaggaggaggatgcacagcagggcaagacaagctaatgggctct
ttggaggctgagctcaaggctctggtctctctggaggaggtgaaggagagtttagtgagg
gggaatgttaaggaggtggaggcagtgtgtgagagtcttgttgagaaagaagtagccagg
ctgctgtcgacctcagagctgaataaagaggcgctgctttacctcaactccatcttcagc
ctcttcccctgccaggcgtggagagcagcacaggccgccctgcagctacactaccacgag
gagggctctctgtccagcagggctccctcagacgtgtggaaaactgtcctcagtcctgct
atgacacccagcaccccatcctgcctccaattcacaaacggcgggccaaaacacaatcat
acccacaaaggtgatcacatcgccaactgcaatgccaaacctacaagcacctcttctcca
gatgccctgcctgtgtttgagctcctctgccactcagttttccacttccagcccagctgg
ttgcccaggttcctcgagctcgtccagcagcagcagggctcagccggcctgggactgagc
ctggcctcttcctcctggggctactccggcgggagaggaggggagggcggggggaacaac
gtgctgctctacaaacgagccctaggcgtcttgtccaggttgaccccagacagagacaag
cggcaggacatggaggtggagctgctgctggtcagtgggcggcctaacgccatcctgcag
gcgctgaggatcctcatggccaagcagcgctgggagcgggtcacccaggtggcccagaag
ttctgcaagcagagtccgctgctcaacaaggagattttcactactctgctgtgcgaggtg
gctcagcacagagacctggacccctatctggagctgctgtgggcgctgtgccccgaggac
ctcactgtcaccaccattctcaacttggtgttgaagaacctcccctgcccgaacaccccg
ccttcctcctcctcctcttcctcctcattctccatgtccagtacaacctcctcaacccct
gctcccttcacagactcccacagcagccagttgaccatcgggctgttgaaacctctgctg
agaaaagtgcttcagagggagaccaagcctagccagcgctacgcagacatcctccagtca
ccatcattcccccctcctgcacctcctcgccagcctgcagagcagcccaggactgccaca
gttcctagcacagagccttctctcgctaacaacatcgccccgtcttctcttgcagaaaca
cccgaacagcagccgtccactcacacggctgtcccaagagacagggtggcactaaccact
aaccctgtctga
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