Cottoperca gobio: 115025530
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Entry
115025530 CDS
T07513
Symbol
dsel
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
cgob
Cottoperca gobio
Pathway
cgob00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cgob01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115025530 (dsel)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
115025530 (dsel)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_3
Sulfotransfer_1
DUF4962
Motif
Other DBs
NCBI-GeneID:
115025530
NCBI-ProteinID:
XP_029313719
UniProt:
A0A6J2RUU5
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All DBs
Position
20:5640874..5647489
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AA seq
1218 aa
AA seq
DB search
MYSKMPGNMAVNWVVYSVFLLLLFAVGTAFSGVFNTTDRDIFTDDLLQVKLTQARATEQW
KIQSTDSHPNLYFNQVDVLHLRQRSSTTHSHIFKVIRAAVLTMLSNVPSYMPPVKHAEFT
SKWNEIYGNNLPPLGLYCLLCPEDSAALQFLIKFMDRMAEYPDWKVTSAPNDEVPMAHSL
TGFATAFDFIYSYLDERRRDVYLKKIRSETEELLELSKYRGWGKQYLQNHQTTNVLAILT
GAIVAGSHDNPESMIWKQVAVNYMEKTMFLLNHVVDGSLDEGVAYGSYTAKSITQYVFLA
QRHFNIDNLQNNWLREHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDTFVMRN
GTGNWLAQQIRKHRPKDGPMGQSSAQRWATLHTEYIWYNSHLTPQPPQDFGKARMHIFSN
WGVVTYGAGLPNGQGNTFVSFKSSKLGGRAVYDIVHDKPYSWVDGWNSFNPGHEHPDQNS
FTFAPNGQVFVSEALYGPKYSYLNNVLVFSPSPTSQCNSPWEGQLGECAKWLRWTDEGVG
DARGEVIVASSHRDTMFVSGEAALAYSPAMRLKSVFRALVLLNSQTLLVLDHVEKWSDSP
VKSLSAFFHNLDIDFKYVPFRFMDRYNGALMDVWDAHYKMFWFDSQGHSPDTRIQEAEQA
AEFKKRWTQYVNVTFPMLGTVSRVAYVLHGPYVKVSSCKFLDNSKNGVRLSLTINNTEKI
VSIATNYKDIGARSTYLGFGGHCKVEDKYQITRYGLGTQLIPKQISSDNQLFDFGFTVNV
IAGVVLFVAIGCLTMQRKFYVCFSKLMRYALFSVLLLWIAELLFVSNSCDQLLCGVKWKG
AGAKKEVNKQITLYELQRLPLPTVVITTLPGSGSEILKYLFYNSSDFVYIRVPTEHLDIP
ETEFEFDSLVDACEWSRSDAMHGRFKIIQGWLHSLVHNIKLHLQNIQLVEGSRVKQSQRV
DPSRDRKKRSRRRERTSELKGKLRASLDRDAEYVREMRRHVAEYPNARVVLNMRSGSWAL
KLPFIQEVVGSSLRTIYLVRDPRAWIYLMVYNSKPSLYSLKNIPQHLSLIFKEDAVRDGC
PAAAPEFKIIQKLLSRSETNPILILANLWLAHTAAVLRVSESLPEESYLQVRFEDVVNFP
QETAESIHTFLGVPVSPAALNQLLFTTSTNLYNLMYEGDISPANINMWRQNMPRKDMRVI
EDVCGSVMRRLGYTRFAS
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaaaaatgcctggaaacatggcagtgaactgggttgtatattcagttttttta
cttctactgttcgcagtggggacagctttctcgggggtcttcaacaccacagacagagac
atttttacagatgacttactgcaggtcaagctcacacaagccagagcgactgagcagtgg
aaaatacagtctactgattcccatcccaacctatattttaaccaagtggatgtgttgcac
ttgaggcaaaggtcctccaccacccacagtcacatatttaaagtcatacgtgcggctgtg
ctcaccatgttgtctaatgtcccctcttacatgccccctgtgaaacatgcggagtttaca
agcaagtggaacgagatttatggaaacaaccttcctcccctgggtctctactgcctgttg
tgcccagaggactctgctgccctgcagtttcttatcaagtttatggataggatggcggaa
tacccagactggaaggtaaccagtgcccccaacgacgaggtccccatggcgcactctctc
actgggtttgccactgcttttgactttatttactcctacctggatgagcggcggagggat
gtttaccttaagaaaattcgctctgagacagaggagctgttggagctatcaaagtacagg
gggtgggggaaacagtacctccaaaatcatcaaaccactaacgtattagccatcctgact
ggtgcaatagtggctggatcacatgacaacccggagtcaatgatctggaaacaagtggca
gtgaactacatggagaaaactatgtttctccttaaccatgttgttgacggctctctggat
gagggagtagcctatggcagctacacagccaagtccatcacacagtatgtcttcttagct
cagcgccattttaacattgacaacctgcagaacaactggctgcgtgaacacttttggttt
tattatgccactctcctgccggggtttcagagaacagttggcatcgcagactccaactac
aactggttttatgggccggagagccagctggttttcctcgacacattcgtcatgaggaac
gggacgggtaactggctggctcaacagatcagaaagcaccgacctaaggatgggccaatg
ggacagtcgtctgcccagcgctgggctacacttcacactgaatacatctggtacaactcc
cacctcacgccacagcctccccaggactttggaaaagctaggatgcatattttctcaaac
tggggtgtggttacctacggagcagggctaccaaacggccagggtaatacttttgtctcc
tttaagtctagcaagctgggtggccgtgcagtctatgacattgtccatgacaagccttac
tcctgggtggatggctggaacagttttaacccaggtcacgagcaccctgatcagaactct
ttcacatttgctcctaatggacaagtatttgtgtctgaagcactttatggtccaaagtac
agctaccttaacaatgttttggtgttcagtccgtctcctacgagccagtgtaacagtcca
tgggagggtcagttaggggagtgcgccaagtggctgcgctggactgatgagggggtgggt
gatgccagaggggaggtgattgtcgcctcctcacacagggacaccatgtttgtgagtggg
gaagcggcgttggcttattcccccgcaatgagactaaagagtgtgttcagagctttagtt
ctgctaaactcacagactctgctggtgcttgatcacgtagagaagtggagtgattcacct
gtgaagtcccttagtgcttttttccacaatcttgacattgacttcaaatacgttcctttc
agattcatggacagatataatggcgctttgatggatgtgtgggacgctcattataaaatg
ttctggttcgacagtcagggtcacagccctgataccaggatacaagaggcagagcaggcg
gctgagtttaaaaagaggtggactcagtatgtaaatgtcactttcccaatgttaggcaca
gtcagcagagtagcttacgtgttacatgggccatatgtcaaagtgtccagctgtaagttt
ttggataacagcaagaatggagtgagactttctttaaccatcaataacacagagaagatt
gtctctattgctacaaactacaaagacataggagctaggtcaacttatctaggatttgga
ggtcactgtaaagttgaggataaatatcaaattactcgatatggccttgggactcaactc
attcccaaacaaatcagcagtgataatcagctttttgactttgggttcacagtcaatgtg
atagcaggggtggttctctttgtggccataggatgtttgaccatgcagagaaagttttac
gtctgcttcagcaagctgatgcgttacgccctcttctctgtgctccttctgtggatagcc
gagctgctgtttgtatctaacagctgcgatcagcttctctgtggggtaaaatggaaaggt
gcaggtgccaaaaaagaagtaaacaaacaaatcacactgtacgagctgcagcggctcccc
ctccccactgtagtcataacaacccttcccggttcaggatcagaaatactcaagtacctt
ttctacaacagctcggactttgtttacataagagttcccaccgagcacctggatattcct
gagactgagtttgagtttgactctctggtcgacgcctgtgagtggtcaaggtcagacgcc
atgcatgggcggtttaagattattcagggctggcttcattcgctggtccacaacataaag
ctgcacttgcagaatattcagctggtagagggcagcagggtcaaacagtcccagagagtc
gacccctcgagggacagaaagaaaagatccaggaggagagagcggacatctgagctgaag
ggcaaactgagagcaagtctggacagagatgcagagtatgttagagagatgaggcgtcat
gttgcggagtaccctaacgcccgggtggtcctcaacatgcggagcgggagctgggcgctc
aaactgccgttcattcaggaggttgtgggatcttccttgaggacaatctacctggtgaga
gaccctcgagcgtggatttatctcatggtttataacagtaaacctagcctttactccctc
aaaaacatcccgcagcacctttccttgatattcaaggaggatgctgtcagagacgggtgc
ccagctgcagcgccagagtttaaaataatccagaaactactttcccgttctgagacaaac
cccatcctgatactggctaatctgtggctggctcacaccgcagcagtgctgagagtcagc
gagagccttcccgaggagtcctacctccaagtgaggtttgaggacgtggtcaacttcccg
caggagacggcagagagcatacacacatttctgggggtgcccgtctcacccgcagccctc
aaccaacttctcttcaccacctccacaaacctgtacaatctaatgtatgaaggagacatt
tcaccagccaacattaacatgtggagacaaaatatgcctcggaaggacatgagagtaata
gaggacgtgtgtgggagtgtgatgaggagactgggttacacgaggtttgctagttaa
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