Cottoperca gobio: 115025996 Help Entry 115025996         CDS       T07513                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism cgob  Cottoperca gobio Pathway cgob04010   MAPK signaling pathway cgob04120   Ubiquitin mediated proteolysis cgob04140   Autophagy - animal cgob04144   Endocytosis cgob04620   Toll-like receptor signaling pathway cgob04621   NOD-like receptor signaling pathway cgob04622   RIG-I-like receptor signaling pathway cgob05132   Salmonella infection cgob05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cgob00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     115025996 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     115025996 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     115025996 (traf6)    04140 Autophagy - animal     115025996 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     115025996 (traf6)    04621 NOD-like receptor signaling pathway     115025996 (traf6)    04622 RIG-I-like receptor signaling pathway     115025996 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     115025996 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     115025996 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cgob04131]     115025996 (traf6)    04121 Ubiquitin system [BR:cgob04121]     115025996 (traf6) Enzymes [BR:cgob01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      115025996 (traf6) Membrane trafficking [BR:cgob04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     115025996 (traf6) Ubiquitin system [BR:cgob04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     115025996 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 TRAF6_Z2 zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 TRAF3_RING zf-RING_11 U-box zf-TRAF_2 Prok-RING_4 CEP104_ZnF Tropomyosin Motif Other DBs NCBI-GeneID:  115025996 NCBI-ProteinID:  XP_029314339 Ensembl:  ENSCGOG00000002157 UniProt:  A0A6J2RWK4 LinkDB All DBs Position 3:10375131..10383415 Genome browser AA seq 571 aa AA seqDB search MACFEISKRSLEEDSYEEGAVGGELSVCALAMLEKERESLLSPSESPSTLISSTSASLQA TAPIQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDAGQRCPVDN ERLLEEQLFPDNFAKREILSLIVRCPNSGCAEKMELRRLENHLAHCQFATVPCPQCQQSV RKSHLEEHTTVECKRRPVSCPDCVASFVHEERELHEQQCPFANVKCQYCDMDLIRDQMES HCDTDCPKAPIACNFSTFGCKERMQRHNLAQHMQEFTQMHMRYMAEFLRGLSLNGTTHKS LWTPGPSVSLEDQGAAASACSGPRAAASCSSNNCAPCQPSEEIQRLREMDGRLVKQDHQL REVIILKETQSGQLAEIRRRVSMLEETVKELESQQCHGIFIWRLKGFSAHLRNQEAGVPV VEHSPGFYTGRPGYKLCLRLHLQAPSAPRCSNYISLFVHTMQGVFDGQLTWPFQGTIRLA ILDQGPEGQNHMEVMETKPDLQAFQKPTIQRNPKGFGYVTFLHLQQLSQRAFVKDDTLLI RCEVTPRFDNMLHREGPTVQPRGPEASVSRD NT seq 1716 nt NT seq  +upstreamnt  +downstreamnt atggcttgctttgaaatcagtaagaggagtttggaggaggacagctatgaagaaggagct gtaggtggagagctgtccgtctgtgcgttggcaatgttggaaaaggagcgggaatcgctt ctcagcccttcagagagccccagcactctcatcagcagcacctccgctagtcttcaggcc actgcccccatccagggctatgatgtggagtttgacccacccttagagagtaaatatgag tgccctatctgcctcatggctttgaggaatgccattcaaaccccctgtggtcaccgtttc tgcaagaactgcattgagaaatccattcgtgatgcggggcagaggtgccctgtggacaat gaaaggctgttagaagagcagttgtttccggataactttgccaaacgggagattctatcg ttaatcgttcgctgtccaaactctggctgtgctgaaaaaatggagctccgacgtttagag aatcatttggcacattgtcagtttgccacggtgccttgcccacagtgccaacagtctgtg agaaagagccacctcgaggagcacaccactgtcgagtgcaaaaggagacctgtgtcatgt ccagattgtgtggcgtcctttgttcacgaggagagagagcttcatgagcagcagtgtccc tttgctaatgtgaagtgccagtactgtgacatggatctgatcagagaccagatggaatct cattgtgatacagattgcccgaaagcacccatcgcctgtaactttagcacctttgggtgt aaggaaaggatgcagcgccacaacctggctcagcacatgcaggagttcacacagatgcac atgcgctatatggctgagttcctgcgtggcctcagcctcaatggcactacacacaaatca ctgtggacgccaggaccttctgtttcccttgaggatcaaggagctgcagcatcagcctgc agtggacccagagcagctgcaagctgcagcagcaacaactgtgccccgtgtcagcctagt gaggagatacagagactcagggagatggatggacgattggtaaagcaggatcaccagctg cgtgaggtcatcatcttaaaagaaacacagtccggccagcttgcagagatcaggcgaaga gtgtcaatgctggaggagacggtgaaggagctggagtcccagcagtgtcacggtatcttc atctggcgcctcaaaggtttctctgcccacctgcggaaccaggaagcaggagtgccagtg gttgagcacagccccggcttctacacaggacgcccaggctacaagctttgcctgcgctta caccttcaggcccccagcgccccccgctgctccaactacatctccctttttgtccacacc atgcaaggagtttttgatgggcagctgacctggccgttccagggcaccatccgccttgcc attctagaccagggccccgagggtcagaaccacatggaggtgatggagactaaaccagac ctgcaagccttccagaagcccaccatccagcgcaaccccaaaggatttggatacgtcacc tttctgcacctgcagcagctgagtcagagagcttttgttaaagatgacactctactcatc cgctgtgaggtgacaccgcgttttgacaatatgcttcaccgtgagggaccaacggtgcag cctagaggaccggaggcctcggtttcgagggactaa

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