Corynebacterium gottingense: CGOTT_00905
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Entry
CGOTT_00905 CDS
T09376
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cgoi
Corynebacterium gottingense
Pathway
cgoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGOTT_00905 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgoi03400
]
CGOTT_00905 (pdg)
Enzymes [BR:
cgoi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CGOTT_00905 (pdg)
DNA repair and recombination proteins [BR:
cgoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGOTT_00905 (pdg)
Prokaryotic type
CGOTT_00905 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WJZ12148
LinkDB
All DBs
Position
204378..205211
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AA seq
277 aa
AA seq
DB search
MSNALLPPAPDAGKPPAGKLTPPRRRAPGSHPAAKGKETELGRTRRARRINRTLAAAFPD
AHAELDFSNPLELLVATVLSAQTTDVRVNQVTPALFATYRTAQDYAAANQAEVEALIRPT
GFYRAKAANLIGLGQKLVTDFGGEVPVALEDLVTLPGVGRKTAHVVRGNVFGKPGLTVDT
HFQRLVARLALSAQRDPVKIEREIAQIIPASEWTMFSHRLIFHGRRVCHAKKPACGACPI
AFDCPDFGAGPTSPEEAAALVTGEEREHILGMLGDAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgccttgcttccccctgcgccggacgccgggaaaccgccggccggcaagctt
acgccgccgcggcgccgcgcaccgggatcccacccggcggcgaaggggaaggagacggag
ctgggccgtacccgccgcgcccggcggatcaaccgcaccctggcggcggcgttcccggac
gcccacgcggagctggacttttccaacccgctcgagctgctcgttgccacggtgctctcg
gcgcagacgaccgacgtccgcgtcaaccaggtcaccccggccctgtttgccacctaccgt
acggcgcaggattacgcggcggcaaaccaggcggaggtagaggcgctgatccgccccacc
gggttctaccgcgccaaggccgccaacctgatcgggctggggcagaagctggtcacggac
ttcggcggcgaggtcccggtcgcgctcgaggacctggtcacgctccctggagtgggacgc
aagaccgcgcacgtggtgcggggcaacgtctttggtaagccggggctcaccgtggatacg
cacttccagcggctcgtcgcgcgcctagcgctgagtgcgcagcgcgacccggtgaagatc
gagcgggagattgcccaaatcatccccgcaagcgagtggacgatgttctcgcaccggctc
atcttccacggccggcgcgtctgccacgcgaagaagccggcgtgcggcgcgtgccccatc
gcgttcgattgccccgacttcggcgcggggccaaccagcccggaggaggcagcggccctg
gtcaccggggaagagcgcgagcacatcctgggcatgttgggtgatgcgcagtga
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