Nakaseomyces glabratus: 2887446
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Entry
2887446 CDS
T01024
Symbol
LIG4, GVI51_E02475
Name
(RefSeq) LIG4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
2887446 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgr03400
]
2887446 (LIG4)
Enzymes [BR:
cgr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
2887446 (LIG4)
DNA repair and recombination proteins [BR:
cgr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
2887446 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
RNA_ligase
mRNA_cap_enzyme
BRCT_3
Motif
Other DBs
NCBI-GeneID:
2887446
NCBI-ProteinID:
XP_445806
UniProt:
Q6FVD8
LinkDB
All DBs
Position
E:complement(271901..274741)
Genome browser
AA seq
946 aa
AA seq
DB search
MADEGGLETGAHDELKGTEEQAVNFAPSPDFLWLCEQLFAKIDHVQFERANNLLTKPVTA
RYYEVISNFTTLWRTTVGNNIYPALRLILPYRDRRVFNIKDYTLIKAICAFLKLPKDSST
EKKLINWKQDAGRSVRLSKFCVEEIKKRRSEPQIDRNERITIDDLNGYLDQLAIERTEQG
RSFKNLANSDIMNKCLTSMTFLEMQYFFDILLKNRPLGGHEHKLLNCWHPDAQDYLSVVS
DLETVAKRLWDPSQRLGNQDLKINIGLAFAPQLATKLHVSYQKIGEKLGWDFFIEEKMDG
ERIQMHYTNFGSDIKFYSRRATDYTYLYGNNLKTGTLANFINLNKNVKDCVLDCEVVTFD
SNNKIVLPFGMVKSSAKNMLSQDGIDTQGFHPLLMVFDVLYLNGATLVDLPYYKRREYLK
QILTPTAHRIEIIKSIRANDEQMIKKSLEKALSVGSEGIILKRYDSRYVIASRSDDWIKI
KPEYLEQFGENMDLVLMGRDPSKKDSLMLGLLDYEEVIQDSPIMVNSQSSEENSQRFRGF
VSLCIIANGISNEEYKEIDRKTKGLWNDSEKIPPLEYMKFGSKVPRQWIDPKKSLILEIK
ARSLDNTRSSERKFAAGCTLFGGYCRQIREDKNWKTCYTLQEFERAKSGNNWRKRGSSKP
QKVISKKRRYNIISSVNKALEDFAELEHRSDIFDGMYFYVLSDYFDGVKRKRIKKSEIQK
VIVANGGQLVQNVITRNYNLNDLRIISSRNTVECNSLIVRGYDIISPKWVFDCLLSGKIM
KLEPSHCFNFSKQLMDYAYKRIDQYGDPYERDINKYEWSSLTSEKICTTAKQQPDVQFDN
SLMDVPHFLFHGRIVFLLSDNNNIQKESFMVDAYGGKVTNELSSANLVIVVGAVTQRRIN
DIRKQISSEVIKQDHPPRIPDMVSEGWLYDCIKQNTQVAEDNYRLP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaaggtggattagaaacgggagctcatgatgagctgaagggaactgaggaa
caagctgtcaattttgctccatctccggatttcttatggctatgtgagcaattgtttgct
aaaattgaccatgttcagtttgagagagctaataatctgttaactaaaccagttactgca
cgatattatgaagttatatcgaattttactacattatggaggactactgtagggaataat
atttatccagcgctgaggcttatattgccctaccgggataggcgtgttttcaatataaag
gactatactctaatcaaagctatttgtgcttttcttaagctaccaaaggactcaagtact
gaaaagaaattaataaattggaagcaagatgcaggaagaagtgtcagattgtctaaattc
tgtgttgaggagatcaagaaacggcgtagcgaaccgcagattgaccgtaatgagaggatt
actatcgatgatttgaacggctatcttgatcagctggccattgaaagaactgaacaagga
cgaagctttaaaaatcttgcaaactcagacataatgaataaatgtttgacatcaatgact
tttttagaaatgcaatacttttttgatattctacttaaaaacagacctcttggtggccat
gaacataaacttctcaactgctggcacccagatgctcaagactatcttagtgtagtatct
gatcttgagactgttgcgaagcggttatgggatccaagccagcgtttaggcaatcaggat
ttgaaaataaatattggtctagcatttgctccgcagctggctactaaattgcatgtatct
tatcaaaaaattggcgagaaacttggttgggatttttttattgaagaaaagatggatggt
gaaagaatccaaatgcattatactaactttggatcagatattaagttttacagtagaaga
gctactgattatacttatctgtatggtaacaatttgaagacaggaacattggcaaatttc
atcaacttgaacaaaaatgttaaagattgtgttttagactgtgaggtagtaacgtttgat
tcaaataacaaaattgtgcttccctttggaatggttaagagcagtgcaaaaaatatgtta
tctcaagatggaattgatacacaagggtttcaccctttgttaatggttttcgatgtgtta
tatcttaatggggcaactctagtagacttgccgtattataagcgacgagaatatctaaaa
cagattctaacaccaacagcccataggatagaaataatcaagtctattagagcaaatgat
gagcaaatgattaaaaaatctcttgagaaagcgttatcagttggatctgaaggcataata
ctcaagaggtacgattctagatatgtaatagcaagtagaagtgatgattggataaagata
aaacctgaatatctggagcaatttggtgagaatatggatttggtattaatggggagagat
ccgtccaaaaaggattccttgatgttgggcttattggactatgaagaagttattcaagat
agtcccatcatggttaattcacaatcatcagaggaaaattctcaaagattcagaggtttt
gtatcgctttgcattatcgcgaacggtatctcaaatgaagaatacaaagaaatcgacagg
aaaacaaaaggcttgtggaatgatagtgagaaaatcccacctttggaatacatgaaattt
ggatcaaaagtcccacgccagtggatagatccaaagaaatcattaatactggaaatcaaa
gctagatcactagataatactagaagtagtgagagaaaatttgcagcaggatgtacatta
tttggaggctattgtaggcaaatccgggaagataaaaactggaagacttgttatacactt
caagaatttgaacgtgcaaaaagcggtaataattggcggaagcgaggtagtagcaagccc
caaaaagtaatatctaagaaaagaagatataatatcatctcctctgtaaataaagccctt
gaagactttgcagaattggaacaccgttcagacatttttgatggcatgtatttctatgtt
ttatcagactattttgatggcgtgaaaagaaagagaataaaaaaatcggaaattcagaaa
gttattgtagcaaatggtggtcagttagttcaaaatgttataacacgcaactataatctt
aatgatttgaggattataagtagtaggaatacagttgagtgcaactcgttgattgttaga
ggttatgatattattagtccgaaatgggtatttgattgcctgttgtctggtaaaataatg
aaattggaaccgagtcactgttttaacttttcgaagcaactaatggattatgcctacaaa
aggattgatcagtacggagatccatacgaaagagatataaataaatatgaatggagttct
ttgactagtgaaaagatatgcacaaccgctaagcagcaacctgatgtacaatttgataat
tcactgatggatgttccacatttcctctttcatggaagaatagtttttcttcttagcgat
aataataatatacaaaaggagagctttatggtagatgcatatggagggaaagtaaccaat
gaactaagcagcgccaatttggttattgttgtcggtgcagtaacccagagacgtataaat
gacatcagaaagcagatttcctctgaagttattaaacaagatcatccaccgcgaatacct
gatatggtgtccgaaggatggctatacgactgcatcaaacaaaatactcaagttgcagaa
gacaattataggttaccatag
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