KEGG   Chlamydia gallinacea: M787_004705
Entry
M787_004705       CDS       T04276                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
cgz  Chlamydia gallinacea
Pathway
cgz03030  DNA replication
cgz03410  Base excision repair
cgz03420  Nucleotide excision repair
cgz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M787_004705
   03410 Base excision repair
    M787_004705
   03420 Nucleotide excision repair
    M787_004705
   03430 Mismatch repair
    M787_004705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgz03032]
    M787_004705
   03400 DNA repair and recombination proteins [BR:cgz03400]
    M787_004705
Enzymes [BR:cgz01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     M787_004705
DNA replication proteins [BR:cgz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     M787_004705
DNA repair and recombination proteins [BR:cgz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     M787_004705
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M787_004705
   MMR (mismatch excision repair)
    DNA ligase
     M787_004705
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      M787_004705
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD HHH PTCB-BRCT BRCT_2 Nlig-Ia HHH_8 5_3_exonuc HHH_3 Arfaptin
Other DBs
NCBI-ProteinID: ANG66602
UniProt: A0A173E089
LinkDB
Position
complement(1049447..1051429)
AA seq 660 aa
MQSADSQEQYLALCQEIIEDDYLYYVLHQPRISDYDYDLKMQELLSIEAMHPEWVVSWSP
SMRLGDRTSGAFPVVAHSQPMLSIANCYTHEDLNDFFSRVEKILGRVPVYTLELKIDGIA
VSLRYEQGILVQALSRGNGFAGEDITANICTIRSLPLRLHHQCPDIVEVRGEVFFSKATF
AQMNAQQKEANRPVFANPRNAAGGTLKLLSSKEAAQRNLELSIYGMLVGGTESHYQNLLL
CKDWGFPVLGRPKQCQTVDEVVQVLDEVGKIRDGLPMEIDGVVIKVDNLRDQQVLGMTGK
HYRWALAYKYAPEQGETLLEDIFVQVGRTGVLTPVAKLRPIVLSGSRISRASLYNEEEIE
RKDIRIGDTVYVEKGGEIIPKIVGVCLEKRPEGTQPWHMPEFCPVCHSRVIRESNKVSVR
CANPRCAAGAIEKIRFFVGRGALDIDHLGEKVITKLFDLGVLQRCCDIFQITEQDLLQLP
GFKDKSVKNLLKSIQESKVVPLDRFIVALGIPFVGSGVASSLAEHFLTFDAFLGTSLEEL
KSIDGVGEKIAQSIIEYFSHSENIDDINKMFSLGVQIVSQKKKSASLGKTFVITGTLETM
TRPEVERIIRNHGGKVTSAISKHVDYIIVGHHPGSKLFKAQELHIPVLYEKDLLTLLNAK
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgcagagtgccgattctcaggagcagtacttggctttatgccaagaaattatagaagat
gattatctatattatgttctgcaccaacctaggatttccgattatgattatgatttgaag
atgcaagagcttctttctatagaagctatgcatcccgagtgggtagtttcttggtcaccg
tctatgcgtcttggggatcgtacatcgggggcgtttcctgttgttgcccattctcaaccg
atgctttctattgctaattgctatacacatgaagatctcaatgattttttttctcgagta
gaaaaaatcttaggcagggttcctgtgtataccttagaactgaaaatcgatgggattgct
gtgtctcttcgttatgaacagggaattcttgttcaagctttaagtcgtggtaatgggttt
gcaggggaagatattacagcaaatatttgtacaatacgctctttgcctttgcgtcttcac
caccagtgtcctgatattgttgaggtgcgaggggaggtttttttctctaaggcaacattt
gcgcaaatgaatgcgcagcagaaggaagcaaataggcctgtgtttgctaatcctagaaat
gctgcgggaggcactttaaagcttttatcttccaaggaagcagcacaaaggaatcttgaa
ctttctatttatggcatgttggtgggaggcacagagtcgcattatcaaaatcttttatta
tgtaaggattggggatttcctgtattgggtaggcctaaacaatgccaaacagtggatgag
gtggtccaggttcttgatgaggtagggaaaattcgggatggcctgcctatggaaattgat
ggagtagtgattaaagttgacaatcttcgggatcagcaggtcttggggatgacagggaag
cattatcgttgggcattagcatataaatatgcccctgaacagggagagacccttcttgaa
gatatttttgttcaggtggggagaacgggagtccttactcctgtagcgaaattgcgccct
atagttttatcgggatccaggatttctcgtgcttctctgtataatgaagaagaaattgaa
agaaaagatattcgcattggtgacacggtctatgtggaaaagggaggagaaattattccg
aaaattgttggcgtttgtttggaaaagcgccccgagggcacacaaccttggcatatgccg
gaattttgtcctgtttgtcacagtcgtgtcattcgtgaatcaaataaagtttctgttcgg
tgcgcgaatcctcggtgtgctgcaggagctatagaaaaaatccgtttttttgttggtcgt
ggagctttagatattgatcacttgggcgagaaggtaatcacgaagctttttgatttaggt
gttttacaacggtgttgtgatatttttcaaattactgagcaagatcttttacaattgccg
ggctttaaagataaatcagtgaaaaatcttctgaaaagcattcaggagtctaaggttgtg
cccctagatcgttttattgttgctctaggcattccctttgttgggagtggggtagcgtcg
tctttagcagaacattttcttacttttgatgcttttttgggcacttcgctagaggaactc
aagtctattgatggtgtgggagaaaaaatagctcaatcaattatagaatatttttctcat
tctgagaatattgacgacattaataaaatgttttctttgggagttcagatcgtctctcaa
aagaaaaagtcagcttctctcgggaaaacttttgtgattacagggactttagaaaccatg
acacgacctgaagtagagaggataatccggaaccatggaggcaaggtaacttcagccatt
tctaagcatgtggactatattattgttggtcaccatcctggatccaagctattcaaagcc
caagaactccatattcctgttttgtatgagaaggatttattaacacttcttaacgctaaa
taa

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