Clupea harengus (Atlantic herring): 105888492
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Entry
105888492 CDS
T09045
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1-like
KO
K08543
testicular receptor 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105888492
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105888492
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
105888492
Nuclear receptors [BR:
char03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
105888492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Prok-E2_C
Motif
Other DBs
NCBI-GeneID:
105888492
NCBI-ProteinID:
XP_012669678
Ensembl:
ENSCHAG00000015983
UniProt:
A0A6P8FAP7
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Position
3:complement(23379745..23388666)
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AA seq
612 aa
AA seq
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MDGETQQIHLVSGEGALGLGHRIQIVTDQQTGQKIQIVTALEQLSAGKQQFILANADYST
AGKVILTKQESPQGKVFLATPDGNQLLFTASDLAGQQIQFVTKDGSEQSPIKSVVEYCVV
CGDKASGRHYGAVSCEGCKGFFKRSIRKSLLYSCRGSGDCVINKHHRNRCQYCRLQRCIA
VGMKQDSVQCERKPVEVCRERPNNCAASTEKIYIRKNLCSPLTAMPTFVTNKEAAKFGGS
SGLLESSMLLNIQQPFPKVENTVLLPASPEMNEQSQDDLSTLAHVVTSLDHLNKAREMSD
GGQNMLATEMHSNEDSTTAEVQVDNEQSASDITRALDTLAKALNPRDGPTHESLEATMQL
VSGDQSGSIMELEGPLLSDSNVPFKLMMPSPTPECLNVNYICESASRLLFLSVHWARSIP
AFQLLGGYDNEINLMKACWNELFALGLAQCSSVMNVATILEAIINHLQTSLQEEKVSAER
IKLVMEHIWRMQEFCNSMSKLSPDVYEYAYLKAVVLFSPDHPGIDNTLQIERFQDKAMME
LQDYVTRTYPEDTYRLPKLLLRLPALRLMSAAITEELFFAGLIGNVQIDSIIPYILKMES
TDYNSQVVTVTV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggatggagagactcagcaaattcatctggtttcaggagaaggtgcattgggactagga
catcgcattcagattgtgacagatcaacagacaggacaaaagatacagattgttacagct
ttggagcagctgtctgctgggaaacagcaattcatcttggccaatgctgactattctaca
gcaggaaaagtgattctaaccaagcaagagtctccccagggcaaagtctttcttgccacc
cccgatggcaatcagctactatttaccgcctctgatctagctggacaacaaatacagttt
gttaccaaagatggttctgagcagtcacccatcaagtctgtggtcgaatactgtgtggtg
tgtggagacaaagcctcgggacgacactatggcgctgtgagctgtgagggctgcaaaggg
ttcttcaagcggagcattaggaaaagcctcttgtactcatgcagaggttctggagactgc
gtaatcaacaagcatcatcgcaaccgctgtcaatattgtcgactacagcgctgcatagct
gtcggcatgaagcaagattctgttcagtgtgagaggaagccggtggaggtatgcagagag
aggcccaacaactgtgcggcatccacagagaaaatctacatccggaagaacctctgtagc
ccactgactgcaatgcccacctttgtgaccaacaaagaagcagcaaagttcggagggtcc
tcaggtttacttgagtctagcatgctactaaacattcagcaaccttttcccaaagtggaa
aacacagtcctgctccctgcatctcctgaaatgaatgagcagtcccaggatgacttgagc
actctagctcacgtagtcacatctctggaccacctgaacaaggccagagagatgagcgat
ggtggccagaacatgctggccacagagatgcacagcaacgaagacagcaccacagctgaa
gttcaggtggataatgaacaaagtgcaagtgacattacaagggcactggacaccctggca
aaggctctgaaccctagagacggccccacccatgagtccctggaggcgaccatgcagctg
gtgtcaggagatcaatctggcagcatcatggagctggagggcccactgctctcagacagc
aatgtccccttcaagctgatgatgccctcgcccacgcccgagtgcctcaacgtgaactac
atctgtgagtcagcctcccgcctcctcttcctctccgtgcactgggcacgctcaatacct
gccttccaacttttaggtggatacgacaatgaaatcaacttgatgaaggcttgctggaac
gagctgttcgctcttggcctggctcagtgttcaagtgtgatgaacgtggccacaatcctg
gaagccatcatcaaccatctccagaccagtctacaggaagagaaagtctctgccgaaagg
atcaagctggtgatggagcacatctggagaatgcaggagttctgcaacagcatgtccaaa
ctctccccagatgtgtacgagtacgcctacctgaaagcagtcgtcctcttcagccccgat
caccctggcatagacaacacgttgcagattgagcggttccaggacaaagccatgatggag
cttcaggactatgtgacaaggacctatcctgaggacacgtacaggctgcccaagctgctc
ctgcgtctcccggcgctccgactgatgagcgcggccatcacagaggagctctttttcgcc
ggtctcatcggcaacgtgcagattgatagcatcatcccctacatccttaagatggaatcc
accgactacaacagccaggtggtcactgtgacagtctga
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