Clupea harengus (Atlantic herring): 105888560
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Entry
105888560 CDS
T09045
Symbol
ddx24
Name
(RefSeq) ATP-dependent RNA helicase DDX24 isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
char03009
]
105888560 (ddx24)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105888560 (ddx24)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
Helicases
105888560 (ddx24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
DsrH
Motif
Other DBs
NCBI-GeneID:
105888560
NCBI-ProteinID:
XP_031438485
Ensembl:
ENSCHAG00000019326
UniProt:
A0A6P8GUK7
LinkDB
All DBs
Position
16:24820030..24830583
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AA seq
1110 aa
AA seq
DB search
MKLKKLVPTGRLAAKRGIRVKGKWKPVALDPSLFADEGMGGLICFEEVTDYMLVDSDRTP
GAAEEKKKKKKKKRKASELDTEEKTEEGGELEEQVEATGDDEDVELTGLEGDDPDLTDKP
PKKKRKKQKKKKKPTSETTGPEEGEEAEDQAVREGEETTGQSQDPETEDDKSKNTDKKKK
KKKKKKKKPSSETTGPEEGEEAEDQAVREGEETTGQSQDPETEDDKSSVKSKNADKKKKK
KKKKKKKKQPDVTEQTPVASQNPESTPATPLAKNKKKVKNWSSTALGQAADVSAWKDLFV
PEQVLQALSKLGFSAPTSIQALALPPAIRDHMDIVGAAETGSGKTLSFGIPLIHNILEWK
RVSEEWKSSQNAGASDATPQDESEGAGASDATPQDESEGAGASDATPQDESEGAGASDAT
PQDESEGAGASDATPQDESAASPLEGATAEQSAESSTKQSESVEASDETPSVEASDETLS
VKVTGVTPSVQVTDETPSVNVTDETLSVNVTDETLSIKVTGKTPSVEVTDETPSLALTEP
DAESEEEEGGDDMGENTLVLEDDDDDDDEEEDGLEEEESGVQSDDSANDLDDQDSNDLDD
VDNDLDDGDNDLEDGDNDQRGCLQIKTAQTAMGESEEGDVKTKDKQPLLALVLTPTRELA
VQVKHHIDAVAQFTGIRTALIVGGMAPQKQNRVLSRRPEVVIATPGRLWDLIRDGHPHLQ
NLRHLRTLVIDEADRMVEKGHFAELENLLEMLRTSQFNPKRQTFVFSATLTMVHSLPMRV
QQKKGRKVVPNTKLDLLMQKVGIKDRPKVIDLTRKEATVETLTETRIHCDKEEKDFYLYY
FLSQYPGRSMVFANSIDCIKRLNSLLMILDHTPLPLHANMHQKQRLKNLERFAERDNCVL
LTTDVAARGLDIPNVQHVIHYQVPRTSETYVHRSGRTARATKQGLSLLLIGPDDLMNFKK
IYRTLGKEEDVPNFPVQIKCMAAIKERVKLAWKIEKIEYHNGRQKQQNSWFTQAAAAMEI
DLDDDVLTSTGRDEEEDAQHLRMVKGMKRQLKHLISQPIFRNDMKTRYPTQMGRLQLPEL
PLANVETALTSVANQKQHEKKRHQKPKKFF
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaagaagctcgtgccgacaggcagactggcggccaaacgaggcatccgcgtc
aaaggcaagtggaaacccgtggcgctggacccgagtctgtttgctgacgagggcatggga
ggactgatctgcttcgaagaggtgaccgactacatgctggtcgattcagaccgaacccct
ggcgcagccgaggagaagaagaagaagaagaaaaaaaaacgaaaggcaagtgaactggac
actgaggagaagacagaagagggtggagagctggaggagcaggtggaggctacaggcgat
gatgaagatgttgagctcacagggctggaaggagatgatccagacttgaccgacaaacca
cccaagaagaagagaaagaagcaaaagaagaagaagaaacctacaagcgagactacagga
ccggaggagggtgaggaggctgaagatcaggccgtgagagagggcgaggagaccacgggg
cagagccaggatccagagacggaagacgacaagtccaaaaacacagacaagaagaagaaa
aagaagaagaagaagaagaagaaaccttcaagcgagactacaggaccggaggagggtgag
gaggctgaagatcaggccgtgagagagggcgaggagaccacggggcagagccaggatcca
gagacggaagacgacaagtcatctgtcaagtccaaaaacgcagacaagaagaagaaaaag
aaaaagaagaagaagaagaagaagcagccggatgtcacagaacaaactccagtggcctcc
caaaacccagagtccacgccggcgacacctctggccaagaataagaagaaggtgaagaac
tggtccagtaccgccctgggtcaggccgctgacgtgtctgcgtggaaggacctgttcgtc
ccggagcaggtgctgcaggccctgagcaagctgggcttctcggcgccaacgtccatccag
gccctggccctgcctccggccatcagagaccacatggacatcgtgggagccgcggagaca
ggcagtggcaagaccctttcatttggcattcctttgatccataatatcttggaatggaaa
cgtgtttctgaggagtggaagagtagtcagaacgccggggcatcagatgccacgccgcag
gacgagagtgagggcgcaggggcatcagatgccacgccacaggacgagagtgagggcgca
ggggcatcagatgccacgccacaggacgagagtgagggcgcaggggcatcagatgccacg
ccacaggacgagagtgagggcgcaggggcatcagatgccacgccacaggacgagagcgcg
gcttctcctctagagggcgctactgcggaacagtcagcggagagcagcaccaaacaaagt
gaatctgtcgaggcctctgatgagactccgtctgtcgaggcctctgatgagactctgtct
gtcaaggtcaccggtgtgactccgtctgtccaggtcaccgatgagactccgtctgtcaac
gtcacagatgagactctgtctgtcaacgtcaccgatgagactctgtccatcaaggtcacc
ggtaagactccgtctgttgaggtcaccgatgagactccgtctttggcactgaccgaacca
gacgctgaatcagaagaagaagaaggaggagacgacatgggggaaaatacgttggtactg
gaagatgatgatgatgatgatgatgaagaggaggatggattggaggaagaggaatctggt
gtacaaagtgatgactctgccaatgatttagatgaccaggattctaatgatttagatgac
gttgataatgatttagatgacggtgataatgatttagaggacggggataatgaccaacgc
gggtgtctccaaataaagacggcacagaccgccatgggtgaatctgaagagggggacgtg
aagaccaaagacaagcagccattactggccctggttctcacccccaccagagaactggcg
gtgcaggtgaagcaccacatcgacgctgttgctcagttcacaggcataagaacagcactc
atcgttggtgggatggccccacagaaacagaaccgggtgctgagtcggaggccagaggta
gtcatagcgaccccgggccgcctgtgggacctgatcagggatgggcacccccacctccag
aacctccgccacctccggactctggtgatcgacgaggcggatcgcatggtggagaaaggc
cactttgcagagctggagaaccttctagaaatgctccgcacgtcccagttcaaccccaag
agacagacgttcgtgttctcggccacgctgaccatggtgcacagcctgcccatgcgcgtg
cagcagaagaaggggcgcaaggtggtgcccaacaccaaactagacctcctcatgcagaag
gtgggcatcaaggaccggcccaaggtcatcgacctgacccggaaggaggcgacggtcgag
acgctcacggagacccggatccactgcgacaaggaggagaaggacttttatctctactac
ttcctgtcgcagtacccgggccggagcatggtgttcgccaacagcatcgactgcatcaag
cggctcaactccctgctcatgatcctcgaccacacgccgctgccgctgcacgccaacatg
caccagaaacagagactcaagaacctggagcgcttcgccgagagagacaactgtgtcctt
ctcaccacggatgtcgccgctagagggcttgatattccaaacgtccagcatgtcattcac
taccaggttccgcgtacctccgagacctatgtccaccgcagtggacggacggcccgcgcc
accaaacagggtctgagcttgctgctgattggcccagacgacctgatgaatttcaaaaaa
atctaccgaactctagggaaggaagaggatgtccctaatttcccagtccagatcaaatgc
atggctgccattaaggagcgcgtgaaactggcctggaaaatagagaagatcgagtatcac
aacggccgacagaaacagcaaaactcctggttcacacaggcggcggcggccatggagatc
gacctggacgatgacgtgctcacgtctaccggtcgtgatgaggaggaagacgcccagcac
ctgaggatggtgaagggcatgaagaggcagctgaagcacctgatctcccagcccatcttc
aggaacgacatgaagaccaggtaccccacgcagatgggcaggctgcagctccctgagctg
ccattggccaacgtggagacggccctgaccagtgtagccaatcagaagcagcatgagaag
aagagacaccaaaaacccaagaaattcttttag
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