Clupea harengus (Atlantic herring): 105888569
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Entry
105888569 CDS
T09045
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105888569 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105888569 (abcb10)
Transporters [BR:
char02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
105888569 (abcb10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
Zeta_toxin
AAA
AAA_25
AAA_30
AAA_5
DUF87
AAA_21
RsgA_GTPase
nSTAND1
AAA_33
P-loop_TraG
PhrC_PhrF
Motif
Other DBs
NCBI-GeneID:
105888569
NCBI-ProteinID:
XP_012669761
Ensembl:
ENSCHAG00000023154
UniProt:
A0A6P3VE33
LinkDB
All DBs
Position
13:9437949..9455840
Genome browser
AA seq
711 aa
AA seq
DB search
MRLFKLTRCTAANLLKRRNIHCCQNRTYWVESTVLKGPRKRREYVVSRPLPLYSFESVTS
PMPCIRLGEVSAPHHVWTLSTHKLNYYSTSTDSRPATQDGVEIKDNKTKIDKSLMPVPSE
DIRRLLHLAHPERWRLSAAMGFLVASSAVTMSAPFFLGRVIDTIYTTPAADFSASLSSLC
LMLAGVFICGGVANAARVYLMQISGQQIVRNLRESLFTSIVRQEVGFFDKTRTGELINRL
SADTTIVGRSLTDNLSDGLRSVAQAGVGVSMMFYVSPSLAAFVLMIVPPMAGLAVIYGRY
LRSISKRTQDSLAEATQLAEERISNLRTVRAFGKERSEVEKYVERINYVFQLAKKEAVLR
AGFFGMTGLSGNIMILSVLYKGGLLTASEQMTVGELSSFLMYTFWVGISVAGFSSFYSEL
MKGFGAGARLWELVDRKPEFPLDEGISLRPEQFKGQLQFHNVSFAYPTRKEAPIFQDLSL
VVPAGSVMAVVGPSGSGKSTMVSLLLRLYDPDSGMITIDGRDVRELNPYWLRSHIGTVSQ
EPVLFSSSIAENIAYGAVDPRNVTAQDIYRAAQIANAHDFVQGFPKGFDTMVGEKGILLS
GGQKQRIAIARALLKNPKILLLDEATSALDSENEYLVQEALERLMVGRTVLIIAHRLSTI
QNADAVAVLDKHRVVECGRHAELLSNRDGLFRRLMEKQAFMHDEQKQILCK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagactatttaagttgacaagatgcacagcagcgaatctactgaagcgcaggaacata
cactgctgtcaaaatcggacttactgggtggaaagtacggttctaaagggaccacgaaag
agacgagaatacgtcgtgtcacgtcctctgccactttatagttttgagtcagtcacgtcg
ccaatgccctgtattcgacttggagaggtttcagcaccccaccatgtatggacactctcg
acgcacaaactaaactattatagtacctccactgattcgaggccagccacacaagatggg
gtagaaataaaggacaacaaaaccaagattgataaaagtcttatgccagtaccatctgag
gacatccgacggctgttgcacctggcgcacccggagcggtggcgcttgtctgcggctatg
ggtttcctagtggcctccagtgctgtaaccatgtcagctccctttttcttggggagagtt
atcgacaccatctacaccacccctgccgcagacttcagtgcctccctcagctccctgtgc
ctgatgctggccggagtgttcatctgtggaggagttgctaacgctgcacgggtgtacctc
atgcagatctcagggcaacagattgtgcgcaacctgcgcgaatctctcttcacctccatc
gtcagacaggaagtcgggttctttgacaagactcgcactggggaactcatcaaccgcctg
tcggccgatacaaccattgtgggacgctcgctgacggacaacctctcagacggcctgcgc
tcagtcgcccaggcaggagtgggtgtcagtatgatgttttacgtgtcccccagtctggct
gcgtttgtgctgatgattgtgccgcccatggctggcctggccgtgatctacggcagatac
ctgcgctccatctccaaacgcacccaggattcgctggctgaggccacacagctggccgag
gagaggatcagtaacctgagaacggtgcgagcgtttgggaaggagcggagcgaggtggag
aagtacgtggaaaggatcaactacgtcttccagctggccaagaaggaggctgtgctgagg
gccggcttctttgggatgactggcctcagtggaaacatcatgatcctgtcggtgctctac
aagggtggcttgctgactgccagtgaacagatgactgtgggagagctttcctctttcctc
atgtataccttctgggtgggcatcagcgttgcaggtttcagctccttctactcagagctg
atgaaaggctttggtgctggagccagactgtgggaactagtggacaggaaaccagagttt
cccctcgatgagggtatatctttgaggccggagcagttcaagggccagctgcagttccac
aacgtgtccttcgcctacccgacccgcaaagaagcacccatcttccaggacctgagcctg
gtggtgccggctggatccgtcatggctgtggtggggcccagcgggtcgggcaagtccaca
atggtgtccctgctgctgcgcctgtatgacccagactctggtatgatcactattgatggc
agagatgtgcgggaacttaatccttactggctgaggagtcatattggaactgtcagtcag
gagcctgtgctcttctccagctccatagcagagaacatagcatacggtgcagtggacccc
aggaatgtcacagctcaggacatctaccgtgctgcccagatcgccaatgctcacgacttt
gttcaaggcttccccaaaggctttgacaccatggtgggagagaagggcattcttctgtca
ggtggtcagaaacaaagaattgccatagcaagagctctgcttaagaaccccaagatactc
cttcttgatgaagctacaagtgcattggattcagagaatgagtacctggtgcaggaggca
ctggagcgtctgatggtgggccgcacggtgctcatcatcgcccaccgcctctccaccatc
cagaacgccgatgctgtcgccgtgctggacaagcaccgcgtcgttgagtgcggtcgccac
gccgagttgctaagcaaccgcgatggacttttccggaggctgatggagaagcaggccttc
atgcatgacgagcagaaacagatcctgtgtaaataa
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