Clupea harengus (Atlantic herring): 105888593
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Entry
105888593 CDS
T09045
Symbol
cdx1a
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105888593 (cdx1a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
105888593 (cdx1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105888593
NCBI-ProteinID:
XP_012669786
Ensembl:
ENSCHAG00000021627
UniProt:
A0A6P3VE51
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Position
6:complement(11113264..11124386)
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AA seq
256 aa
AA seq
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MYVSYLLEKDPGMNGTASRHPNLNFNHQNFLPAPPQYTDYSAYHHFPTLPGGDPNHGNLS
TGGWNPIYNPPREDWSAYDHGASHLSTNAGSVSLNPRDGTPILLPEQSLVQSVTASPPGQ
LSPDPQRADSYQWMRRNPALGNTAGKTRTKDKYRVVYNDHQRVELEKEFHYSRYITIRRK
AELALTLGLSERQVKIWFQNRRAKERKMTKRKMQQPQQAPSPDLGDHGNNFSTATSSSGT
SGFLTDTITMRIKEEF
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttatctgttggagaaggatccgggcatgaacgggacggccagccggcat
cccaatttaaacttcaatcatcaaaacttcctccccgcgccgccgcaatacacagactac
agcgcgtaccatcacttccccacgttacccggaggagacccaaatcacggaaatctcagc
acgggcggatggaacccgatatacaatcctccgcgtgaggactggtccgcatatgaccac
ggggccagtcacctcagcactaacgcgggctctgtaagtttaaacccaagagacgggact
cccatcttactgccggagcaaagtctcgtgcagtctgtcacggcatcaccacctgggcaa
ctgtcgcccgacccgcagcgcgcggactcctaccagtggatgaggaggaacccggcactg
ggaaacacagctggaaagacgcggactaaggataagtaccgtgtggtgtacaatgatcat
cagcgtgtcgaactggaaaaggagttccactacagccgctacatcaccatccgccgcaag
gctgaacttgccctcactctcggcctatcagagagacaggtgaagatctggttccagaac
cgtcgggcaaaggagaggaagatgaccaagcgtaagatgcagcaaccgcaacaggcccca
tcacctgacctgggtgaccacggcaacaacttttccacggcaaccagcagcagtggcacc
tcaggctttctgacggacaccataaccatgcgcatcaaagaggagttctaa
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