Clupea harengus (Atlantic herring): 105888607
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Entry
105888607 CDS
T09045
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105888607
04812 Cytoskeleton proteins [BR:
char04812
]
105888607
Cilium and associated proteins [BR:
char03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
105888607
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
105888607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
105888607
NCBI-ProteinID:
XP_031424866
Ensembl:
ENSCHAG00000001608
UniProt:
A0A6P8FMM3
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All DBs
Position
6:complement(11818229..11879510)
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AA seq
808 aa
AA seq
DB search
MRSHKHHSKDDGPCFMPTVNSYKLHLAAVKSLIPDRDPQKTFDLQVCHELTRNIHMESLR
TTPPRLDLRHLVHGGKRPLHTPALAFVNEQRGPERHLPGPRAVAPSHSMWDQKCQSIRTK
PRRHTHSAGASHSHNPVSHHQASGETTTTAVLDSSLAGFPIAFRSRDDCASSPERLDLDS
RGLVECPLMVGLEKLRLLNLQHNLLTRVHSLESLRRLVFLDLYDNRISDLAGIACLASLR
VLMLGKNRIQRICHLDNLTKLDVLDMHNNQISQMENLSQLSELRVLNLAGNRISGVEGLQ
GMDSLMELNLRRNSISSVTEVDRLPCLQRLFLSYNSISSFDELACLRESPSLCELTLDGN
AVAEETWYRQAALRCMPHLRLLDMKRITEEDRRMAGVLARREDEKKRDNHKQVINKEKRR
LAIRNAAQQWEGLKSCLDLPTQNGPKEEVSPENSPTHSSAQTNGIAQDPSPDEFRRVSPI
LPLDRPAVITENRLRSVNRPNSPRDPRLLDAGGNIVQSLSLSESHLAELDGDTLRLFGAG
ALEALERGWGVQTASAVTTIAFRYISFDAIIPMLPRIRVKFPNLAHLIFLEANISRLPQL
AALAQVRRLDQITIHPEGNPVVALSLWRSFLLYRLHHLNLQRLNGVEVTINDVIAAERLF
GTLGHIAATETPHCRLLLLLEESRKRQLQFLLEGRGRRVGQSPEELKENGRLLGEGLSRA
LFNYPNRDTGSDGPEESTAEALAQTYVQGLVQRTTDTSVKREALHKLWPSMFVELVRDCV
LETRGRSGAQPHQAYPQACLSRLTHLSK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcccacaaacatcacagcaaagacgatggaccgtgcttcatgcccacggttaac
agttataaattgcaccttgctgctgtaaaatctctgatacctgatagagatcctcaaaaa
acgtttgaccttcaagtatgccatgaactgaccagaaatattcacatggagtcactgagg
acaaccccaccaagattagaccttcgccatcttgtccatggtggcaagaggcctctgcat
acccctgcgctggcatttgtcaatgagcagaggggccctgagcgtcatctgcccggccct
cgagccgtggcccccagtcactctatgtgggaccagaagtgccagtccatcagaactaag
ccccggcgtcacactcacagcgcaggggcctcacactcacacaaccccgtttcacaccat
caggcttcaggagagacgaccactaccgcagtgttggacagctctctggctggcttccct
attgccttccgatcccgcgatgactgtgcctccagcccagagcgtctggatttggacagt
cgtggactggtagagtgccccctaatggtgggtctggagaaactgcgtctgctgaacctc
cagcacaacctgctgacacgtgtgcacagcttggagtcactgagacgcctggtcttcctg
gacttgtatgacaaccgtatctccgacctcgccggcatcgcttgtctcgcctcgcttaga
gtgcttatgctgggaaaaaacaggattcagagaatatgccacctggataacctcaccaaa
cttgatgtcctggacatgcacaataatcagatctcccagatggagaacctgtcacaactg
tcagagctgcgggttctaaacctggcggggaaccgcatctccggggtggagggactgcag
gggatggattcactgatggagctcaacctgagacgaaactccatctcctctgtgacggag
gtggaccggcttccctgcctgcagcgcctcttccttagctacaacagcatcagcagtttt
gatgagctggcctgcctgcgagagtcaccctccctgtgtgaactcacccttgatgggaac
gctgtagcggaggagacatggtacaggcaagctgccctgcgctgcatgcctcacctgcga
ctcctggacatgaagcgcattacggaggaggacagacggatggctggtgttttggcccga
agggaagatgagaaaaagagagacaatcacaagcaggtcatcaacaaggagaaacggcgg
ctggccattcgtaatgccgcacagcagtgggaggggctaaagtcctgtctggacctgccc
actcagaacggaccaaaggaggaagtgagccctgagaatagtcccacccacagctccgcc
cagaccaatgggatcgctcaggatccctctccagatgagttcaggcgagtgagccctatc
ttgcctctggatcgtccagcagtgatcactgagaaccggctacgctccgttaatcgcccc
aacagcccacgagacccaaggttactggatgcgggcggcaacattgtgcagagtctctcc
ctgtctgagagccacctggcggagctggatggggacacgctacgtctgttcggcgccggc
gctctggaggccctggagcgcggctggggcgtgcagacggccagcgccgtcaccaccatc
gccttccgctacatcagcttcgacgccatcatcccaatgctgccgcgcatccgcgtcaag
ttccccaacctggcgcaccttatcttcctggaggccaacattagccgtctgccccagctg
gctgccctggcacaggtgcgtcgcctggaccagatcaccatccaccccgagggcaaccca
gtggtggccctgagcctctggaggtccttcctgctgtaccgcctgcaccacctcaacctg
cagaggctcaacggcgtggaggtgaccattaatgatgtcatcgctgcggagcgtttgttt
ggaacgctgggtcacatcgctgccacggaaacaccacactgccgactgctgctgttgctg
gaggagagcaggaagcgccaactgcagttcctgctggagggccgtgggcggcgagtgggt
cagagccctgaggagctgaaagaaaacggacgcctgctgggggaggggcttagccgagcc
ctcttcaactaccccaacagagacactggcagcgacggaccagaggagagcaccgcggag
gcgctggcccagacgtacgtgcagggcctggttcagcgcacgaccgacaccagtgtgaag
cgggaggccctgcacaagctgtggccctccatgtttgttgagctggtgagggactgtgtg
ctggagacgcggggccgctccggggcccagccccaccaggcctacccacaggcctgcctc
agcagactcacgcacctcagcaagtga
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