Clupea harengus (Atlantic herring): 105888799
Help
Entry
105888799 CDS
T09045
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform-like isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00071
Fatty acid degradation
char01212
Fatty acid metabolism
char03320
PPAR signaling pathway
char04148
Efferocytosis
char04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
105888799
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105888799
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
105888799
03320 PPAR signaling pathway
105888799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
105888799
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
105888799
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
105888799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
105888799
NCBI-ProteinID:
XP_031416394
Ensembl:
ENSCHAG00000021335
UniProt:
A0A6P8EVY1
LinkDB
All DBs
Position
23:complement(7003098..7024106)
Genome browser
AA seq
789 aa
AA seq
DB search
MAEAHQAVAFQFTITPEGIDLHLSHQALTEVYLSGIRSWKKRIIRLKNSVITGVYPASPS
SWLFVVIAILATMYTSSDPSMGLISKIQEHLPVSEVLSVHCRTLVSAVVFSTLLWLSLIF
TMRFCLKQLLSYHHWMFEQHGQISNTTRVWVGLVKMFSGRQPLLYSYQGSLPNLPLPAIE
STIKSYLESVRPLMDNTEFERMTTLANDFENGLGKRLQWYLKLKALWAANYVSDWWEEYI
YLRGRNPIMVNSNYYGMDFLYVTPTPIQAARAGNTIYALLLYRQKLNREEIKPSRVPGTL
IPLCAAQCERMFNTTRIPGEETDTVAHWQDSDYVAVYHKGRYFRLWVYQAGRLLSPREIE
HQIQRILDDSSPPLPGEEKLGAFTAGDRIPWAQARKEFFSSGVNKRSLDCIEKAAFFVTL
CDDEQGMMGDDPATSLDSYAKALLHGKCYDRWFDKSFSVVVFKNGKNGLNAEHSWADAPV
VAHLWEYVLATDSFQLGYSEEGHSKGEVDSSLPAPQRLNWDISSQCQERISQSLSVAQVL
ADDVDFHVFSFRDFGKGRIKRFRLSPDAFIQVALQLAYYRDRGMFCLTYEASMTRLFREG
RTETVRSCTNESCAFVRALENAESVAVCQHLFRQACEKHQLLYRMAMTGSGIDRHLFCLY
VVSKYLGEESPFLKEVLPEPWRLSTSQTPVQQVELFDLVNHPEYISCGGGFGPVADDGYG
VSYIIVGENMINFHISSKHSCAQTDSHKYGTHIKRALEDLLHIMSSDLKEPPRSQNQTGV
NQVKAKKDL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctcaccaggcagtggccttccagttcaccatcactcctgaggggatcgac
ctgcacctgtcccaccaggccctcacggaggtctacctctctgggatcagatcctggaaa
aagaggattattcgtcttaagaacagtgtgatcactggtgtgtaccctgctagcccctca
tcttggttgtttgtcgtcatagcaatcctggccaccatgtacacaagctcagatccctcc
atgggcctcatcagcaagatccaggagcaccttcctgtcagcgaggtcctcagtgtccac
tgccggactctggtgtcagctgtggtgttcagcaccctgctctggctctcactgatcttc
accatgcgcttctgtctgaagcagctcctctcttatcaccactggatgttcgagcagcac
ggacagatctccaacaccaccagagtctgggtggggttggtgaagatgttctcaggcagg
cagcctttactgtacagctatcaaggctccttgcccaacctccctctacctgccattgag
agtacaatcaagagttacctggagtctgtgcgcccactgatggacaatactgaatttgag
aggatgactactctcgctaacgattttgagaacggtctggggaagaggcttcaatggtat
ctcaaactgaaagcactatgggctgcaaactatgtgagtgactggtgggaagaatatatt
tacttgagaggacgcaaccccatcatggtcaacagcaactactatggcatggacttctta
tatgtgacaccaactccaatccaggcagctagggctggaaacaccatctatgccttactg
ctctaccgtcagaagctcaacagagaagagattaaacctagtcgtgttccaggcacttta
atacctctctgtgcagctcagtgtgagaggatgttcaacaccacacgtattccaggagag
gagactgatactgttgcccattggcaggacagtgattacgttgcagtgtaccacaaggga
cgctattttcgcctctgggtgtatcaggctgggcggttgctctctccaagagaaattgag
catcaaattcagcgtatccttgatgactcatcacccccattacctggagaggagaaacta
ggagctttcacagcaggagaccgaatcccttgggcgcaagccaggaaagagttcttcagt
tctggtgtgaataagcgctctctggactgcattgagaaggcggccttctttgtgactctg
tgtgatgatgaacaaggcatgatgggagacgatcccgccaccagtctggactcttatgcc
aaggctctcctgcatgggaagtgctatgatcgatggtttgataaatccttctcagtggtg
gtcttcaagaatggaaagaatggcctgaatgcagagcactcctgggctgatgcccctgtg
gtggctcacctgtgggagtatgttctagccactgatagtttccagctgggatacagtgaa
gagggccacagtaagggagaggtggactcctctctacccgcgccacagcgccttaactgg
gacatctcttcacaatgtcaggagcgcatcagtcagtctctttctgtggcccaggtgctg
gctgatgatgtggacttccatgttttctcatttcgagattttggaaagggaagaatcaag
aggtttcggctcagtccagatgccttcattcaagtggccctccagctggcctactacagg
gatagggggatgttctgtctgacgtatgaggcatcaatgacacgtttgttccgtgagggg
aggacagagaccgtgcgttcatgcaccaatgagagctgtgcctttgtcagagcactggag
aatgcagagagtgtagctgtttgtcagcacttgttccgccaagcttgtgaaaagcatcag
ttactctaccgtatggccatgactgggtctggcattgacaggcaccttttctgcctatat
gttgtctccaaatacctaggggaagaatctccatttcttaaagaggttctacccgagccc
tggcgtctctccaccagtcaaactccagttcagcaagttgaactttttgacttggttaac
catccagagtatatctcctgtggaggaggatttggccctgtggcagatgatggctatggt
gtgtcttacatcatagttggagagaacatgattaactttcacatctccagcaagcactca
tgtgctcaaactgactcccataagtatggcacacacatcaagagggctctggaggacctg
ctgcacataatgtcctctgatctaaaggaacctcctcgaagccagaaccaaactggagtg
aaccaagtcaaggccaagaaagacctttag
DBGET
integrated database retrieval system
