Clupea harengus (Atlantic herring): 105888864
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Entry
105888864 CDS
T09045
Symbol
tob1b
Name
(RefSeq) protein Tob1b
KO
K14443
protein Tob/BTG
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105888864 (tob1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105888864 (tob1b)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105888864 (tob1b)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105888864 (tob1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Med3
TFIIA
T2SSM
Motif
Other DBs
NCBI-GeneID:
105888864
NCBI-ProteinID:
XP_012670074
Ensembl:
ENSCHAG00000024289
UniProt:
A0A6P3VER0
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All DBs
Position
23:complement(7873139..7877354)
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AA seq
353 aa
AA seq
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MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHI
GEKVDPVVEQAAKESGLDIDDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNTEN
GSELDREIKNSFNPEAQVFMPISDPVGGSVGGGSSESSSPSPPFGQSSAAVSPSFLPRST
IPLTFTTATFAATKFGSTKMKNSGRGGASNGNSNGNGGKVARTSPTNLGLNVNNLLKQKA
MSTSMHSLYSLGLGTQQQQQQQQQQQQQQQQKASALSPNAKEFVFPNLQGPGSAGGAFGG
DNPLNLSPLQYNNAFDMFAAYGSLNDKSLMDGLNFSLSNMQYSNQQFQPVMAN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaatccaagtagccctcaacttcattatatcctacctgtacaacaaactc
ccccggcgccgcgtgaatatctttggcgaggaactcgagaggcagctgaagaagaagtat
gagggacactggtacccagacaagccatacaaaggctcaggattcaggtgcatccacatc
ggggagaaggtagaccccgtggtggagcaggcggccaaagagagtgggttggacatcgac
gacgtgcggaataacctgccgcaggacctgagcgtgtggatcgacccgttcgaggtgtcc
taccagatcggcgagaagggccccgtcaaggtcctttacgtggacgacaacactgagaac
ggttccgagctggacagggagatcaagaacagctttaaccccgaggcgcaggtcttcatg
cccatcagcgacccggtgggcggtagtgtcggcggcggctcgtccgagtccagctcgccc
tcgccacccttcggccagtcttcggctgcggtcagcccctccttcctgccgcgctccacc
ataccgctcaccttcaccacggccacctttgccgccaccaagtttggctccaccaagatg
aagaacagtgggcgcggtggcgctagcaatggcaacagcaacggtaatggcggcaaggtg
gcccgcacctcccccaccaacctgggcctgaatgtgaacaacctgctgaagcagaaagcc
atgtccacctcgatgcactcactctacagtctggggctgggcacccagcagcagcagcag
cagcagcagcagcagcagcaacaacagcagcagaaagcctctgcactgtcccccaatgct
aaggagtttgtgttccccaaccttcagggcccaggcagtgccggaggagcgtttggaggt
gacaaccccctcaatctcagccccctccagtacaataatgccttcgatatgtttgcagcc
tacgggagcctcaacgacaagtccctcatggatggcctaaacttcagtttgagcaacatg
cagtattctaaccagcaattccagccagtcatggctaactaa
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