KEGG   Clupea harengus (Atlantic herring): 105888864
Entry
105888864         CDS       T09045                                 
Symbol
tob1b
Name
(RefSeq) protein Tob1b
  KO
K14443  protein Tob/BTG
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105888864 (tob1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105888864 (tob1b)
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105888864 (tob1b)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     105888864 (tob1b)
SSDB
Motif
Pfam: BTG PAM2 Med3 TFIIA T2SSM
Other DBs
NCBI-GeneID: 105888864
NCBI-ProteinID: XP_012670074
Ensembl: ENSCHAG00000024289
UniProt: A0A6P3VER0
LinkDB
Position
23:complement(7873139..7877354)
AA seq 353 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHI
GEKVDPVVEQAAKESGLDIDDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNTEN
GSELDREIKNSFNPEAQVFMPISDPVGGSVGGGSSESSSPSPPFGQSSAAVSPSFLPRST
IPLTFTTATFAATKFGSTKMKNSGRGGASNGNSNGNGGKVARTSPTNLGLNVNNLLKQKA
MSTSMHSLYSLGLGTQQQQQQQQQQQQQQQQKASALSPNAKEFVFPNLQGPGSAGGAFGG
DNPLNLSPLQYNNAFDMFAAYGSLNDKSLMDGLNFSLSNMQYSNQQFQPVMAN
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgcagcttgaaatccaagtagccctcaacttcattatatcctacctgtacaacaaactc
ccccggcgccgcgtgaatatctttggcgaggaactcgagaggcagctgaagaagaagtat
gagggacactggtacccagacaagccatacaaaggctcaggattcaggtgcatccacatc
ggggagaaggtagaccccgtggtggagcaggcggccaaagagagtgggttggacatcgac
gacgtgcggaataacctgccgcaggacctgagcgtgtggatcgacccgttcgaggtgtcc
taccagatcggcgagaagggccccgtcaaggtcctttacgtggacgacaacactgagaac
ggttccgagctggacagggagatcaagaacagctttaaccccgaggcgcaggtcttcatg
cccatcagcgacccggtgggcggtagtgtcggcggcggctcgtccgagtccagctcgccc
tcgccacccttcggccagtcttcggctgcggtcagcccctccttcctgccgcgctccacc
ataccgctcaccttcaccacggccacctttgccgccaccaagtttggctccaccaagatg
aagaacagtgggcgcggtggcgctagcaatggcaacagcaacggtaatggcggcaaggtg
gcccgcacctcccccaccaacctgggcctgaatgtgaacaacctgctgaagcagaaagcc
atgtccacctcgatgcactcactctacagtctggggctgggcacccagcagcagcagcag
cagcagcagcagcagcagcaacaacagcagcagaaagcctctgcactgtcccccaatgct
aaggagtttgtgttccccaaccttcagggcccaggcagtgccggaggagcgtttggaggt
gacaaccccctcaatctcagccccctccagtacaataatgccttcgatatgtttgcagcc
tacgggagcctcaacgacaagtccctcatggatggcctaaacttcagtttgagcaacatg
cagtattctaaccagcaattccagccagtcatggctaactaa

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