Clupea harengus (Atlantic herring): 105888866
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Entry
105888866 CDS
T09045
Symbol
psmd11b
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 11B
KO
K03036
26S proteasome regulatory subunit N6
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
105888866 (psmd11b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
char03051
]
105888866 (psmd11b)
Proteasome [BR:
char03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
105888866 (psmd11b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPN6_N
PCI
RPN6_C_helix
TPR_ESP1
Csm6_6H
TPR_12
Motif
Other DBs
NCBI-GeneID:
105888866
NCBI-ProteinID:
XP_012670075
Ensembl:
ENSCHAG00000019372
UniProt:
A0A6P3VFF4
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All DBs
Position
23:complement(10309296..10317249)
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AA seq
422 aa
AA seq
DB search
MATAAVVEFQRAQSLISTDRNASIDILHSIVRRDVQQDDEEAVKVKEQSILELGNLLAKT
GQAAELGGLLKFVRPFLISISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIDWAKAE
KRTFLRQALEARLVSLYLDTKRYQEALTLGTQLLQELKKMDDKALLVEVQLLESKTYHAL
TNLPKARAALTSARTTANAIYCPPKLQAALDMQSGIIHAAEEKDWKTAYSYFFEAFEGYD
SIDSPKAVTALKYMLLCKIMLSQPEDVQNLTSGKLALRHAGKETDAMKSVAQASKNRSLA
DFEKALTEYKAELRDDPIINTHLNKLYDKLLEQNLIRDIEPFSRVQITHISSLIKLSKGD
VERKLSQMILDEKFHGILDQGEGVLIIFDEPPVDKTYEAALETIHNMSKVVDSLYNKAKK
LT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcggcagtggttgagtttcagagagctcagtctctcattagtacggaccga
aatgcctctatcgatattttacactctatagtgaggcgagatgtccaacaggatgatgag
gaggcggtcaaagttaaggagcaaagcattcttgagctgggcaacctcctggccaagact
ggtcaggctgcagagcttggtgggctgctgaagttcgtgaggcccttcctcatctccatc
agtaaggccaaggctgcccgactagtgcgctcccttctggacctcttcctggacatggag
gctgcaacagggcaggaagtggagctctgcctggagtgcattgattgggccaaggctgag
aagaggaccttcctcagacaggccttggaggctcggctggtctcgctgtatttggacacc
aaacggtatcaggaagctctgacccttggtactcagctgctgcaggagctcaaaaagatg
gatgacaaggctctgctggtggaggtgcagctgctcgagagcaagacctaccatgcactc
actaacctacccaaggcccgggctgcactcacctctgccagaaccacggctaatgccatc
tactgcccacccaagcttcaggcagctctggacatgcagtcaggaatcatccacgcagct
gaggagaaggactggaagacggcctactcctacttcttcgaggcctttgagggttatgac
tccatcgacagccccaaggccgtcactgcactgaaatacatgctcctctgcaagatcatg
ctcagccagccagaagatgttcagaacttgactagtgggaaactggcactgcggcatgcc
gggaaagaaacagatgcaatgaaaagtgtagcacaagccagcaagaacagatcattagct
gactttgaaaaggctctgacagaatacaaagcagagctgagggacgaccccattatcaac
acgcatctgaataagctgtatgacaagctgctggagcagaacctcatcagggacattgag
cctttctccagagtacagatcacacacatatcttcactcatcaaactctcaaagggggat
gtggagaggaaactatcacaaatgattctggatgagaaatttcatggtattctggaccaa
ggtgaaggggttcttatcatatttgatgagcctccagtggacaagacctacgaggcagcc
ttggaaaccattcataacatgagcaaagtggttgattcactttacaacaaagcaaagaag
ctgacatag
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