Clupea harengus (Atlantic herring): 105888871
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Entry
105888871 CDS
T09045
Symbol
atrnl1b
Name
(RefSeq) attractin-like protein 1 isoform X1
KO
K24332
attractin
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
char04091
]
105888871 (atrnl1b)
Lectins [BR:
char04091
]
C-Type lectins
Others
105888871 (atrnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_5
Kelch_1
Kelch_4
Kelch_3
Kelch_6
EGF_LMN_ATRN
PSI
CUB
Kelch_2
EGF_TEN
NANM
EGF_Teneurin
EGF_2
EGF_laminin
TMEM100
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
105888871
NCBI-ProteinID:
XP_012670081
Ensembl:
ENSCHAG00000026533
UniProt:
A0A6P3VEI0
LinkDB
All DBs
Position
23:8529215..8645395
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AA seq
1386 aa
AA seq
DB search
MDGGKMLRTELLFLRQRTYTSSGLQDVNRYLLLCVMFYLVLVTHASPSKTCDKNCLSGKC
INGTCVCDRGWVGDQCQHCQGRFKLTEPSGYLTDGPINYKYKTKCTWLIEGYPNAVLRLR
FNHFATECSWDHMYVYDGDSIYAPLVAVFSGLIVPEVRGNETVPEVETTSGYALLHFFSD
AAYNLTGFEIFYSINSCPNNCSGHGKCTTGNSIASRVYCECDEYWKGEACDIPYCRNNCG
SPDHGYCDLTGEKLCVCNDSWQGPDCSLTVPSTESYWFMPSVKPSGTSLGRASHKAVVQE
KVMWVVGGYTFNYSSFQMILNYNLESGIWNTVPISSGPLPRYGHSLALYQDDIYMFGGKL
EMGSGNVTDELWVFSIPSRTWSQRSPSTQAHTGQVFAAEGHSAHVAELENGDPVMVVIFG
YSSIYSYISNVQEYNIRTNEWQIPETRGAIALGGYGHSSVYDPGSKCVFVHGGYKSLPNK
NNNKYGLVDDLYRYEVPTRTWTILKESSYPRYLHSAVLLGGTLLIFGGNTHNDTSLSNGA
KCFSTDFLAYDIACDEWKVLPKPNLHRDVNRFGHSAVTSNGSMYVFGGFSSVLLNDVLVY
RPPNCEAFPDEKRCVNAGPGVRCVWSRNRCVFWEPGPVNGTLPASFCPLKPAPIDERCYR
FSDCASCTSNTNGCQWCDEKKCISAGSNCSMPVKNFTRCTLRNEQICAKLVNCKSCSLNR
NCQWDAQQQECHALPAQLCGEGWSHVGEVCLRINSSRESYDNAQHYCKNLDGSIASLTKA
KQVDFVLEELQKYQLQEKKLSPWVGLRKINVSYWAWENTAPFTNTSLQWLAGEPSDSGFC
AYLELSDSTGLKANACTATTDGLICEKPVVSPNQNARSCKKPCSLRTSCANCTSQTMECM
WCASTKRCVDSNAYVISFPYGQCLEWQTGECVSQNCSGLRTCSKCLEQPECGWCGDPSNT
GRGQCMEGSYRGPMRSPAKLNQAQGQQGLSLTHSQDMVLEPALCPKDKGFEWAFIQCPAC
QCNGHSTCVNGSVCEQCRNLTTGTQCDTCMPGYHGDPTNGGKCQACKCNGHANVCQVMTG
KCYCTTKGIKGDQCQLCDSENRYLGNPLRGTCYYNLLIDYQFTFSLLQEDDHYYTAINFM
AQPEQTNKNLDMSINASNNFNLNITWSVGSTAGTISGEEVPIVSKTNIKEHRDSFSSEKF
SFRSNPNITFYVYVSNFSWPIKIQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKI
KQTCWASRRREQLMRERQQMASRPFASVSVAPEVGCEYVKLLQGGSEGPPKPVAMEPCSG
GKAAVLTVLICLPRSPSGVPPPGQSGIAIASALIDTSQQKPMDFKEKSQGLKNRKALPPA
HQGTCV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgggaaaatgctaagaactgagctgctttttcttagacagaggacatacacg
agctctggactgcaggacgtcaacagatatttattgttgtgcgttatgttctacctggtg
ctcgtcacgcacgcctctccgtcgaaaacctgtgacaaaaactgtctctccgggaaatgc
atcaatgggacatgcgtttgcgaccgaggatgggtaggagaccagtgtcaacactgtcag
ggccgattcaagttgacggaaccttcggggtacctcaccgacggcccaatcaattacaag
tacaaaaccaaatgcacctggctgatcgaaggatacccaaacgcggtcctgaggctacgc
ttcaaccactttgccaccgagtgcagctgggaccacatgtacgtctacgacggagactcc
atctacgcccccctggtggccgtgttcagtggcctaatcgtaccagaggtgcgtggcaac
gagaccgttccagaggtggagaccacttcgggctatgcactcctccacttctttagcgat
gctgcctataacctcaccggcttcgagatcttctactcgataaactcgtgtccgaacaac
tgctcgggccacggcaagtgcacaacgggcaactccatcgccagccgcgtgtactgcgag
tgcgacgagtactggaagggcgaggcctgcgacatcccctactgccgcaacaactgcggc
agccccgaccacggctactgcgacctgaccggcgagaagctctgcgtgtgcaatgacagc
tggcaaggtcctgattgttcgctgaccgtcccgtccaccgagtcctactggttcatgccc
agcgtgaagccctccgggacgtcgctgggccgggcgtcccacaaggccgtagtgcaggag
aaggtcatgtgggtggtgggcggctacacctttaactacagctccttccagatgatcctc
aactataacctggagagtggcatctggaacactgtgcctatcagcagcggacccctgccg
agatacggccactccctcgccctttaccaggatgacatctacatgtttggcgggaagcta
gagatgggctcaggcaacgtgacggacgagctgtgggtcttcagcatcccaagtcggacg
tggtctcagaggtcgccgtcgacgcaggcgcacacgggccaggtgttcgccgcggagggc
cactcggcccacgtggcggagctggagaacggcgacccggtcatggtggtcatcttcggc
tactcgtccatctacagctacatcagcaatgtgcaggagtacaacatcaggacgaacgag
tggcagatcccggagactcggggggcgattgctctgggcggctacggccacagtagcgtg
tacgacccgggcagcaagtgtgtgtttgtccatggcggctacaagtctctgcccaacaag
aacaacaacaaatatggcctggtggacgacctgtaccgctacgaagtccccacgcgcaca
tggacgatcctgaaggagagctcttatccccgctacctgcactccgccgtgcttctgggt
ggaaccctcctcatcttcggaggaaacacccacaacgacacgtcgctgagtaacggggcc
aagtgcttctccaccgactttctggcatatgacatcgcttgtgacgagtggaaagtcctt
cccaaaccgaacctccatcgtgacgtgaaccgctttggacactcggctgtaaccagtaac
gggtccatgtatgtgtttgggggcttctccagtgtgctcctgaacgacgtgctcgtctac
cgacccccaaactgcgaggccttcccggacgagaagcggtgcgtgaacgctggccccggg
gtccgctgcgtctggagtcggaaccgctgtgtcttctgggagccgggccccgtcaatggc
accttgcccgcgtccttttgccctctgaaacccgcccccattgacgagcgctgctatcgt
ttctcggactgcgccagctgcacctccaacaccaacggctgccagtggtgcgatgagaag
aagtgcatctcggccgggagcaactgctccatgccggtgaagaacttcacccggtgcacg
ttgaggaacgagcagatctgcgccaagctggtcaactgcaagagctgctccctcaaccgc
aactgccaatgggacgcccagcagcaggagtgccacgccctcccagcccagctctgcggg
gaaggctggagccacgtcggcgaggtgtgcctgcgcatcaactccagccgcgagagctac
gacaacgcgcagcactactgcaagaacctggacggcagcatcgcctccctcaccaaggcc
aagcaggtggacttcgtcctggaggagctgcagaagtaccagctgcaggagaagaagctg
tcgccgtgggtcggcctgcgcaagatcaacgtgtcgtactgggcgtgggagaacacggcg
cccttcaccaacacctcgctgcagtggctggccggcgagcccagcgactctggcttctgc
gcctacctggagctgagcgacagcacgggcctcaaggccaacgcctgcaccgccaccacg
gacggcctcatctgcgagaagcccgtcgtgagccccaatcagaatgcccgctcctgcaag
aagccgtgctcgctgcgcaccagctgtgccaactgcaccagccagaccatggagtgcatg
tggtgcgccagcaccaagcgctgcgtcgactccaacgcctacgtcatctccttcccctac
ggccagtgcctggagtggcagaccggcgagtgtgtgtctcagaactgttcggggctgcgg
acgtgcagtaagtgcctggagcagccggagtgcggatggtgcggtgaccccagcaacacg
ggccgtggccagtgcatggagggctcgtaccgcgggcccatgcggagcccggccaagctc
aaccaggcccagggccagcagggtctctcgctcacccacagccaggacatggtgctggag
ccggccctctgccccaaagacaagggcttcgagtgggccttcatccagtgcccggcctgc
cagtgcaatggccacagcacctgtgtcaacggcagtgtttgcgagcagtgcagaaacctc
accactggaactcagtgcgacacctgcatgcccggttaccacggagacccaaccaacgga
ggaaagtgccaagcctgcaagtgcaacggccatgccaacgtgtgccaggtgatgactggc
aagtgttactgcaccaccaaggggatcaaaggggatcagtgccaactatgcgactcagag
aaccgttaccttggcaaccccctgaggggaacctgttactacaacctgctgatcgactac
cagttcacgttcagtctgctccaggaggacgaccactactacaccgccatcaacttcatg
gcccagcctgaacaaaccaataagaacttggatatgtccatcaatgcctccaataatttc
aaccttaacatcacctggtcggttggatcaacagctggaaccatctctggtgaggaggtc
cccatcgtctccaagacgaacatcaaagagcaccgagacagcttctcctccgagaagttc
agcttccggagcaaccccaacatcaccttctacgtctatgtcagcaacttctcctggcca
atcaaaatccagatcgccttctcccagcacaacagcatcatggacctggtgcagttcttt
gtgacgtttttcagctgtttcctgtctctcttgctggtggctgcagtcgtgtggaagatc
aagcagacctgttgggcgtctcgtcgacgtgagcaactgatgcgggagcgtcagcaaatg
gcgagtcggccctttgcgtccgtgtctgtggctccagaggtgggctgtgagtacgtgaag
ctgctgcagggaggctctgagggtccccccaaacctgttgccatggagccatgttcaggg
ggcaaggcggcggtgctgacggtgctcatctgtctcccacgcagcccctctggagtccca
ccacctggccaatcaggcatcgccatagccagcgccttgattgacacctcccagcagaag
cccatggacttcaaggagaagagccagggtctgaagaaccgcaaagcccttccaccagca
caccagggcacatgtgtctga
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