Clupea harengus (Atlantic herring): 105888886
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Entry
105888886 CDS
T09045
Symbol
ubox5
Name
(RefSeq) RING finger protein 37
KO
K10600
U-box domain-containing protein 5 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105888886 (ubox5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105888886 (ubox5)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105888886 (ubox5)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
U-box type E3
105888886 (ubox5)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5918
U-box
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
105888886
NCBI-ProteinID:
XP_031426954
Ensembl:
ENSCHAG00000019139
UniProt:
A0A6P8FU42
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Position
7:29255616..29264934
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AA seq
565 aa
AA seq
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MVVNLCQPPFQTTVQCNKLCADGYDVSNLLSEDPALRRRGFKLEYFLRPPVQVTLGFRWQ
VEVCRVDVELWPEGMDQGGATRKVEVHSSSEADPEPTQGHFLQVGRCEMREGVQVCFRAP
RFRHRAPFPHPPPAPSPGATHSDLWSRGLQSLGSVARLRLSIPFSSAGSQLGFKALSVWG
LPARSCPPEALEEFQRAHRPPLAPTKPLMPPNPPASAPTHPSDLATDPDDAIPEEFLDPL
TQELMVLPMVLPGGAVVDLSSLEEYQRREATWGRLPSDPFTGVPFTADSKALPCPLLKTR
IDQLILRRGGRPGVCGGKEGGATLGPQASRLIPQTPALAQTPALAQTPALAQTPKPPQVP
ETAPRSLTSHAPPSCPPGNAAVDTHTSTFTNGAPSYQGLGGGGGGGGTPALRRKRGLDAP
TPDVDEQRDGRSEADRTSPRAENTLEPRKRTRADQQTHSTGSHEERLSASLDAALSCALQ
GRPSYTGQRRAPAHTPHTGEDQCALCSVSLTRYPTSPTAYTLPCRHLLCRPCLTRKTPSN
ARGPQIICPTCGSAAPASAVTRVHH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcaacctttgccagccaccctttcagaccactgttcagtgcaataagctgtgt
gccgatggctatgacgtctccaacctgctctctgaggaccccgccctccggaggcgtggc
ttcaaactggagtacttcctgcggccgccggtccaggtgacgctggggttccgctggcag
gtggaggtgtgccgggtggatgtggagctgtggccggagggcatggaccagggcggcgcc
acccgcaaggtggaggttcacagcagctcggaggccgaccccgagcccacccagggccac
ttcctccaggtgggtcggtgtgagatgcgggagggggtgcaggtgtgcttccgtgccccc
cgatttcgccatcgagcgcctttccctcacccgcccccggcgccctcccccggcgccacg
cactctgacctctggagccgggggctgcagtccctgggcagcgtggcgcggctgcgtctg
agcattccgttcagcagcgcaggctcgcagctggggttcaaagcgctgtccgtgtggggg
ctccccgctcgctcctgtccccctgaagccctggaggagttccagagggcccaccgcccc
cccctggcacccacaaaacctctcatgcctcccaacccgcctgcctctgcccccacccac
ccctctgatcttgccaccgacccagatgatgccatccccgaggagttcctggaccccctg
acccaggagctgatggtcctgcccatggttctgcccggcggggcggtggtggacctcagc
tccctggaggagtaccagcgccgcgaggccacctgggggcggttgccaagcgaccccttc
accggcgtgcccttcacagcggactctaaggccctgccgtgcccgctgctgaagacccgc
attgatcagctgatcctccggagaggcgggcggccgggcgtctgtgggggcaaagaaggt
ggcgccaccctgggcccgcaggcttccaggcttatccctcagacccctgccctggcacag
acccctgccctggcacagacccctgccctggcacagactcctaaaccgccacaggtgccc
gagacagcccccaggtccctgacctcacacgccccacccagctgtcctccaggtaacgct
gctgtggacacccacacgtccaccttcactaacggggcgcccagttaccaaggcctgggt
gggggtgggggtgggggggggaccccagccctgaggaggaagagagggctggacgctcca
actccagatgtggacgaacagagggatgggcgctccgaggctgacaggacgtctccaaga
gcagagaacacactggagccacgcaagagaacaagagcagaccagcaaacacactccaca
ggctcccacgaggagcgtctgtctgccagtctggacgcggctctgagctgtgctctgcag
gggcgcccctcctacaccggccaaaggagggcgccggcccacaccccacacacaggcgag
gaccagtgtgcactttgctcggtgtctctcacccgctacccgaccagtcccactgcctac
acgcttccatgcaggcatctcctctgccgcccatgcctcacccgcaagactccatcaaat
gcccgaggaccccagatcatctgcccaacctgcggctctgctgccccagccagtgcagtg
acacgtgtgcaccactga
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