Clupea harengus (Atlantic herring): 105888890
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Entry
105888890 CDS
T09045
Symbol
nkx6.1
Name
(RefSeq) homeobox protein Nkx-6.1
KO
K08030
homeobox protein Nkx-6.1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105888890 (nkx6.1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
105888890 (nkx6.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
ABC_trans_N
PKK
Motif
Other DBs
NCBI-GeneID:
105888890
NCBI-ProteinID:
XP_012670108
Ensembl:
ENSCHAG00000020361
UniProt:
A0A6P3VFD5
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Position
12:complement(3794076..3797252)
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AA seq
323 aa
AA seq
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MLAVGQMDGSRQSAFLLSTPPLAALHSMTEMKTPLYSAYPLSCNGPASSTSPTATSPNPG
GIPVCSPGIKTSSGFCSIGSPHHCSPATPHGINDILSRPSLLAANAAAAAVAASSSAGIL
SGLPRFSSLSPQPPHGLYFSPGAAAVAVARYPKPLTDLPGRTPIFWPGVMQSPHWRDARF
ACSPHQNSVLLDKDGKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQ
VKVWFQNRRTKWRKKHAAEMASAKKKQDSETERLKGASENEDDDDDYNKPLDPNSDDEKI
TQLLKKHKPNSALLIHTSENESS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggtggggcagatggacgggtctcgccagagtgctttcctcctcagtaccccg
ccactagctgctctgcatagtatgaccgaaatgaagacgcctctctattcagcttacccg
ctatcttgcaatgggcctgcatcatccacttctccgacagctacctctccaaatcctggc
ggtattcctgtatgttctccgggaattaaaacatcgtctggattttgctctatcggatcg
cctcatcactgttcgcctgccacccctcacggaataaacgacatcctgagccgcccctca
cttctcgccgccaatgctgctgccgctgccgtggctgcatcatcttctgctggaattctg
tccggactgccccgcttcagcagcctgagccctcaacctccgcacggcctgtacttcagt
ccaggcgccgcggcagtggctgtggctcgctacccgaagcctctgacagacctccctggg
aggaccccgatcttttggcccggagtcatgcaaagccctcactggagagacgccaggttc
gcctgttcacctcatcagaattccgttctgttggataaagatggaaagaggaagcataca
cgccctacgttttcaggacagcagatttttgccctggaaaagacttttgagcaaacaaaa
tacctagcaggtccagagagagcacgcctggcctactctttgggaatgacagagagccaa
gtgaaggtatggttccagaatcgcagaacgaagtggaggaaaaagcatgccgctgagatg
gcttcagccaaaaagaagcaagactctgagacagagaggctgaaaggtgcctcagagaat
gaagatgacgatgacgactacaacaaacctctagatcccaactcagacgacgagaaaata
acgcagctactgaaaaaacataaaccaaactctgccctccttatccacacctcggagaac
gagagttcttag
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