Clupea harengus (Atlantic herring): 105888898
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Entry
105888898 CDS
T09045
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b
KO
K14319
Ran GTPase-activating protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105888898 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105888898 (rangap1b)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105888898 (rangap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
BUD22
Motif
Other DBs
NCBI-GeneID:
105888898
NCBI-ProteinID:
XP_012670115
Ensembl:
ENSCHAG00000009208
UniProt:
A0A6P3VFE0
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Position
23:9417534..9426433
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AA seq
580 aa
AA seq
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MASEDINELTEALARTHVGDGELSYKGQGLKLDNAESVAKIVRAIEEFQGLRALRLEGNT
IGVEAAQAIAKALESKSELQKCNWSDMFTGRLRSEIPAALRSLGSALMTSGARLTELDLS
DNAFGPDGVKGIETLLKSPVCYTLRKLKLNNCGMGIGGGKILADALIKCHKKSSATGAPL
SLKMFIAGRNRLENEGAKALAKAFQLMGSLEEVHMPQNGINHKGITALAEAMLQNPNIRV
LNFNDNTFTKRGALSMAQALRNLRNVEIINFGDCLVRSEGAIAIGAALRDGLPIVKELNL
SFGELSEAAALVVARCVKDKTHLEKLDLNGNCFGEEGCEAVKEAVESMNMADMLGSLSDD
EGEPDEEDDDVDEEEDEDEDDDEEEEIGEQSGEEELEESGLGESSANGSPVKPDPVSPTC
CPELQAFLSSPTAEKLLDLGAKRTLLIEQQVDYSDHSKTADAFLKICSVYKEEPEVKKAV
LETTDALLKKALSGSCFQSYSFLSSLMVMLGLLKGEGRAQRVSVMPGHLLALSHSVEQEY
FPLDHADVLQAFVSKSGKALTSCSSARETLQAVLDRRTAA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggaagacatcaacgagctgacagaggcactggccagaacgcatgtgggtgat
ggagagttaagctataagggacaaggcctgaaattggacaatgcggaatctgttgctaaa
atcgtgcgtgccatagaggagttccagggactgcgagctctgaggcttgaaggaaatact
attggggttgaggcagcacaagcaattgctaaggctctggagagcaaaagtgaattgcag
aaatgtaactggagtgacatgttcacagggcgcctccggtctgaaatccctgctgccctg
agatcgttaggcagtgccttgatgacatcaggagccagacttactgaactggacctgagt
gacaatgcctttgggccagacggggtaaagggcattgaaacccttctgaagagtccagtc
tgttacacccttcgcaaactgaaactcaataactgtggcatgggtattggaggaggcaag
atcttagcagatgcactgattaagtgccataagaagtccagtgccacaggcgcccccctg
agtctgaagatgttcattgcaggcaggaaccgtttggagaatgaaggcgccaaggcactg
gccaaggctttccagttgatgggcagtctagaggaagtccatatgccacaaaatgggatc
aaccacaaaggcataaccgctttggctgaagccatgctgcagaaccctaatatccgagta
ctgaacttcaatgacaacaccttcaccaagagaggggcactgtcaatggctcaggccctc
aggaacctccgcaacgtcgaaataataaactttggtgattgcctggtgcggtctgaagga
gctatcgccatcggtgctgcactgagggatggactgcccattgtcaaggagctgaacctg
tcctttggtgaactgtcagaggctgcggcgctggtagtagccagatgtgtgaaagacaaa
acccacctggagaagttggatttgaacggtaactgctttggtgaagaaggctgcgaagca
gttaaagaggctgtggagagcatgaacatggcagacatgttgggctcactcagcgatgat
gaaggtgagccagatgaagaagatgatgatgtcgatgaagaagaagatgaggatgaagat
gatgacgaagaagaagaaataggggaacagagtggcgaagaggagttggaggagagtggt
ctgggtgaatcaagcgctaatggaagccctgtgaagccagacccggtgtcacccacctgt
tgtccagaactccaggccttcctctcttcacccacagcagagaagcttctggatcttgga
gccaaaaggacacttctcatagagcagcaggtggattactccgatcatagcaagactgct
gatgcttttctgaagatttgctctgtgtataaagaggaacctgaagtgaagaaagcagtc
ttggaaaccacagatgcgcttttgaagaaggctctatcaggttcctgctttcagtcctac
agcttcctctcctctcttatggtgatgttggggttgttgaagggagagggcagggctcag
agggtgagtgtgatgcctggtcacctgttggcgctgtcgcattctgtggagcaggagtac
ttccctctggaccatgcagatgtgcttcaggcctttgtgtcaaaaagtggcaaagcctta
accagctgtagcagtgcccgtgagaccctacaggccgtactggacagaaggactgctgct
taa
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