Clupea harengus (Atlantic herring): 105888899
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Entry
105888899 CDS
T09045
Symbol
tbx3a
Name
(RefSeq) T-box transcription factor TBX3a isoform X4
KO
K10177
T-box protein 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105888899 (tbx3a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Other transcription factors
T-box
105888899 (tbx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T-box
TBX2-3_RD
TBX
Motif
Other DBs
NCBI-GeneID:
105888899
NCBI-ProteinID:
XP_012670120
Ensembl:
ENSCHAG00000006952
UniProt:
A0A6P3VFE5
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Position
12:14448129..14456527
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AA seq
707 aa
AA seq
DB search
MSFLMRDPVIQGTSMAYHPFLPHRGPEFAMSAMLGHQPPFFPALALPPNGSLSLPGALGK
PIMDQLMSAAEHGLHFTSLGHQAAAAHLRPLKTLEPEEEVEDDPKVHLEAKELWELFHKR
GTEMVITKSGRRMFPPFKVRCTGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPE
MPKRMYIHPDSPATGEQWMSKVVNFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRAND
ILKLPYSTFRTYVFPETDFIAVTAYQNDKITQLKIDHNPFAKGFRDTGNGRREKRKQLAL
QSMRSYEDQQKKENGASDDSSGEQAPFKCFRQASSPAVSTVGPPNLKDFCDSDEDSDDES
KDEHLKEGPDSSKISTTTEDAKDHEASPSKAHFMDNDSSCRSRESATRTEKSKADSRQSP
ITVISSTTRSGEDLKSPTRDHSKVDECSRSIGKDSYLPLTVQTESVAHLNQSHLHNFGFP
PGLAGQQFFNHLGGAHPFLLHPSQFNMGGAFSNMAAGMGPLLAAVSSGGVSTMDTASMAS
PSQSLTGAPGLPFHLQQHVLASQGLAMSPFGGLFPYPYTYMAAAAAASSQSVHRHPFLNA
VRPRLRYSPYPMSMSVPDSSTLLTTTMPTMASSAVEMKGDGMATSPVSATLDSTSEVTSR
SSTISSGSVSLSPKTCSEKDSTNELQSIQRLVSGLDSKQDRPRSVSP
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcctgatgagagatccagttatacaaggaacaagtatggcataccatccgttt
ttacctcaccggggtccggaatttgccatgagtgcaatgttgggtcaccaacctcccttt
ttcccggccctggcgctacctccaaatggctcgctgtctctcccgggcgccctgggaaag
ccaatcatggaccagttgatgagcgccgccgaacacggcctccacttcacctcgctcggg
caccaagctgccgcagctcatctgaggcctctcaaaacgctggagcctgaggaagaggta
gaggatgatccgaaagttcacttggaggcgaaggaactttgggagctcttccataagaga
ggcactgaaatggttatcacgaagtcaggaaggcggatgttccccccgtttaaagtgagg
tgcactggtttggacaagaaagcgaagtacattttgttaatggatattgtggcggctgac
gactgcaggtataaatttcataactcgcgctggatggtggcagggaaggctgaccccgaa
atgccaaagaggatgtacattcacccggacagtccggccactggtgagcagtggatgtcc
aaagtcgtcaattttcacaagctgaagctgacaaacaacatctcagacaagcatggattt
acgattctgaactccatgcacaagtatcaaccgaggtttcacattgtgagagcaaacgac
attctgaaacttccgtacagcacgttcaggacttacgttttccccgaaactgacttcata
gcagttactgcctaccaaaatgacaagataacacaattgaaaatcgaccacaatcctttt
gctaaaggctttcgtgacactggcaatggaaggcgagaaaaaaggaaacaactggccctg
cagtctatgcgttcctatgaggaccagcagaagaaagagaacggggcgtcagacgattct
tcaggcgagcaggctccgttcaagtgttttcgccaggcctcttctcccgcagtgtcgacc
gtggggccaccaaatctgaaagatttctgtgacagcgacgaagatagtgacgacgaaagc
aaagacgaacacttgaaagaagggccagattcgagtaaaatctccaccactaccgaggat
gcaaaggaccacgaagcgagcccctccaaagctcacttcatggataacgattcctcttgc
cgctcgcgggaaagcgccacgaggactgagaaaagcaaggcggactcgaggcagagccct
atcaccgtcatctccagcacgactcgatccggagaagacctcaaaagtcctacccgtgac
cacagcaaagtggacgagtgcagcaggtctatcggcaaagacagctacctacccttgact
gtacagacagaaagcgtcgcacacttaaaccagagccacttgcacaactttggatttcca
ccgggtctggcaggacagcagttttttaatcatttgggtggtgcccaccctttcctcctt
catcccagccagtttaatatgggaggtgcgttttcgaatatggctgcagggatgggcccc
ttactggcagctgtatcctccggaggggtgagtaccatggacacggcgagcatggcgtca
ccctcgcaaagcctgacgggagccccaggactgccttttcatttgcagcaacatgtcttg
gcatcacagggccttgcaatgtctccattcggtggtctgttcccctacccatacacgtac
atggcagccgctgccgcagcctcctctcagtcagtccatcgccacccgtttctgaacgca
gtgcgtccccggctcaggtacagcccttatccgatgtccatgagcgtcccggatagtagc
actttgctcactaccaccatgcccacgatggcgagcagcgcagttgagatgaaaggagat
gggatggccacaagccccgtgtccgctaccctggactcgacctcggaggtcaccagccgg
tcctcgaccatatcatctggatcggtatcactgtcaccaaaaacttgttccgagaaagat
tccaccaacgaattgcagagcatccagcgcctggtcagcggacttgactcaaaacaagac
aggcctcgaagtgtatccccttga
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