Clupea harengus (Atlantic herring): 105889019
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Entry
105889019 CDS
T09045
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105889019 (trpm5)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105889019 (trpm5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
AKAP95
SesA
DUF4508
DUF4618
Motif
Other DBs
NCBI-GeneID:
105889019
NCBI-ProteinID:
XP_031425528
Ensembl:
ENSCHAG00000027512
UniProt:
A0A6P8FAG7
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Position
6:28978801..28990105
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AA seq
1218 aa
AA seq
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MQTLDETPLHLLQPRRQCIRCGGEVEITQAQSRTLCVCRCYSRHEMAAQRHRDMALGMQS
VRQEKGHWAAGRAGDIDFIGSSRTRGKFVRVRSSTDPAQIYELLTEQWGLSPPHLVVALV
GGDELTQMKPWLRDTVRKGLVKAAQSTGAWILTSGLRFGITKHLGQAVRDHSLASTSSKF
RVVAIGIAPWTMIQNRDMLLTARPDQPAAYPTEDLPHGPVYSLDSNHSHCVLVEEDPQRP
GATSEMRVKFLKHISLQRTGYGGTSSFEIPVLCLLVHGEPRILQRMFKGILNATPWLILA
GSGGVADILVTLMNRGCWDSDVVQELLQDTFPSGHHSTDITSWVKLIQKILDHGHLLTVH
DPEQESSELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSEIFNGDVEWRA
CDLEEVMMDALVNDKPDFVRLFVDNGVNLGEFLTYGRLQELYCSVSEKSLIHFLLLKKLQ
EKQMILASARVPGPTHSEPGDRRARFTLHEVSKVLKDFLHDSCKGFYQKLPAEKGSKSRL
FQSHKNLPDMEQRCENPWRDLFLWAILQNRQQMANYFWAMGPEAVAAALAGCKILKQMAH
LESEAESARSMKEAKYEQFALDLFSECYSNSEDRAYVLLVRKTHCWSKSTVLTLATEADA
KCFFAHDGVQAMLTKIWWGAMTTDTSISKLVLSFFCPPLIWTNLIKFSDQELESRGGGEE
FAELDSLDTEKALLLTDEDPLGSEAVGNPGTESHTAAWSRFLLRRWRRFWGAPVTVFLGN
VIMYFAFLILFTYVLLLDFRPPPPLGPSGAEIMLYFWVFTLVLEELRQSFFTDEDSNILK
KLKLYVEDNWNKCDMVAIGLFVMGVSCRMVENTYEAGRTVLALDFMIFTLRLIHIFAIHK
QLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVATQALMHPNDPRLDWVFRRVLYRPYLHI
FGQIPLEEIDAAHMPQTNCTMELGEILKGTLPPCPNIYANWLVILLLVIYLLVTNVLLLN
LLIAMFSYTFQVVQGNTDIFWKFQRYNLIVEYHSRPALAPPFIIISHLSQLVLSLFKKTE
SKLEDLERELPMVLDQKLMTWETVQKENYLAKLERQHWESSEERLKSTSSKVQSVLKTVE
GFKEQVKRLSSMEAQVKYWIAECFNQSTSKWDRDAPKDSRSKASSSIAPQPQPSLTAKQE
SGIHLGYGANKKLPYIDE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactctggacgagactcccttgcacctgttacagcctcgaaggcagtgcattcga
tgtggaggagaggtagagatcacacaggcacagagcaggactctgtgtgtatgccgatgc
tactctagacatgagatggcagcgcagagacatagagacatggccctaggcatgcagagt
gtccggcaggagaagggccactgggcagcagggcgggctggagacattgatttcattggg
tccagcaggaccagaggcaagtttgtgagggtccgcagctccactgatcctgcccagatc
tatgagttgctcactgagcagtgggggctttctccacctcacctggtggtggcgctggtt
ggtggagatgagctgacacagatgaagccatggctgagggacacagtgaggaaaggcctg
gtgaaggccgctcaaagtacaggtgcatggatactcaccagtggccttcgctttggcatc
accaaacacctcggacaggcagtgagggaccactctctcgccagcacatcctcaaaattc
cgtgttgtggctataggcattgcaccatggaccatgatccagaacagagacatgctgctt
actgccaggccagatcagccagcagcctaccccacagaggacttgcctcatgggcctgtg
tactccctggactccaaccactcccattgtgtcctggtggaagaggatccccagcgtcca
ggggccaccagtgaaatgagagtcaaattcctcaagcacatctccctgcaacgcactgga
tatgggggtacaagcagctttgagattccagtgctgtgtttgttagttcatggagagcca
aggatcctccagagaatgttcaaagggattttgaacgcaacaccttggttgatactggca
ggctcagggggcgtggcagacatccttgtgactctgatgaatagaggatgctgggattct
gacgtggttcaggagttactacaggacaccttccccagtgggcatcacagcactgacatc
acttcctgggtgaagctgattcagaagatacttgaccatggccacctgttaactgtgcat
gacccagaacaggagagctctgaattagatactgtcatcctcaaagccttggtgaaggct
tgcaaaagtcaaagccaggaagctcaggacttccttgatgagttgaagttagccgtggcg
tggaacagagtggacattgccaagagtgaaatcttcaatggagacgtggaatggagggcc
tgtgacttagaggaggtcatgatggacgcactggtcaatgacaagccagacttcgtgaga
ctgtttgtggacaacggtgtgaacctgggggagttcttgacctacggccgcctgcaggag
ctctactgctccgtgtcggagaagagcctgatccacttcctgctgctgaagaagctccaa
gagaagcagatgatcctggcctcagcccgcgtccccggcccaacccattcagaaccagga
gaccgacgggctcgctttacactccacgaggtctccaaagtcctgaaagacttcctccat
gactcctgcaaaggcttctatcagaagctaccagcagagaaaggaagcaaaagtcgcctc
tttcaaagtcacaagaaccttccggatatggagcaacgttgtgagaatccctggagagat
cttttcttgtgggctatcctgcaaaacagacagcagatggccaactacttttgggctatg
ggtccagaagcagtggctgcagctttggctggctgtaaaatactgaagcaaatggcccat
ctggaatcagaggcagagtcagcacggagtatgaaggaggccaagtatgagcagtttgca
ctggatctcttcagtgagtgctactccaacagtgaggaccgggcctatgtgctgctggtg
aggaagacccactgctggagcaagtccactgtgctcactctggcaacagaggcagacgcc
aagtgcttcttcgcccatgatggtgtgcaggccatgctgacgaagatctggtggggagcc
atgacgacagacacatccatctccaaactggtgctctcattcttctgccctcctctcatc
tggaccaatctcatcaagtttagtgaccaggagctggagagtagaggtggtggggaggag
tttgcagagctggacagcctggacacagagaaagccctactgcttactgatgaggatcca
ctgggctcggaggccgtgggcaacccaggcactgagagccatactgcagcctggagtcgc
ttcctcctccgccgctggcgtcgcttctggggcgcgcccgtcaccgtcttcctgggcaac
gtcatcatgtactttgctttcctgatcctcttcacctatgtcctcctcctggacttccgt
cccccgccgcctctaggtccctctggggcagagatcatgctctacttctgggtgttcact
ctggtgctggaggagctcaggcagagtttcttcacggatgaggactccaacatcctgaaa
aagctgaagctctatgttgaagataactggaacaagtgtgacatggtggccataggtctt
tttgttatgggggtgtcctgcaggatggtggagaacacatatgaagcagggcgcactgtc
cttgcattggacttcatgatcttcactttaagactcatccatatttttgccatacacaag
caacttgggcccaagatcatcattgttgaaagaatgatgaaagatgtgttcttcttcctc
ttcttcctgagtgtgtggctgatagcctatggtgtggccacacaagctttgatgcacccc
aatgacccccgcttggactgggtcttcagacgagttctatatcgcccctacctccacatc
tttggacagatacccctggaggaaatagatgcggcccacatgccacagaccaattgcacc
atggagctaggagagatcctaaagggtaccctcccgccatgccccaacatctatgccaac
tggctagtcatcctgctgctggtcatctaccttctggtcaccaacgtgctgctactcaac
ctgctgattgctatgttcagctacacctttcaggttgtgcagggaaacacagacatcttc
tggaagttccagcgttacaacctgatagtggagtaccacagtcgccccgccctggcccct
cccttcataatcatcagtcacttatcccaactggtcctcagcctgttcaagaagacagag
tcaaagctggaggatctcgagagagagttgcctatggtactggaccagaagctcatgaca
tgggagacggtacagaaggagaactatttagccaaactggaacgccagcactgggagagc
agtgaggagagactgaagagcacatcctccaaagtacagagtgtactgaaaacagtcgaa
ggattcaaggaacaggttaaacgtctgtcatctatggaagctcaggtaaaatactggatt
gctgaatgtttcaatcagagcacctctaaatgggacagagacgcccccaaggattcacgt
tctaaggctagcagcagcattgctccacagccacagcccagtctaacggcgaaacaggag
agtggtatacacctgggatatggagccaacaagaagctcccctacatcgatgagtga
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