Clupea harengus (Atlantic herring): 105889037
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Entry
105889037 CDS
T09045
Name
(RefSeq) very long-chain acyl-CoA synthetase-like
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03320
PPAR signaling pathway
char04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105889037
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
105889037
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
char01004
]
105889037
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105889037
Enzymes [BR:
char01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
105889037
Lipid biosynthesis proteins [BR:
char01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
105889037
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
105889037
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
RecX_HTH1
Motif
Other DBs
NCBI-GeneID:
105889037
NCBI-ProteinID:
XP_012670248
Ensembl:
ENSCHAG00000024270
UniProt:
A0A6P3VEP8
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Position
6:28287730..28294705
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AA seq
618 aa
AA seq
DB search
MYVIFTLLAGLAILPFLVYVRFPYFLHDLRYILNGIALGKRVGKYSSRKPCYTILDRFLE
RVNLHPHKSFIIFENDTYSYQDADRRSNKVARTLSQHCKLQEGDAVALFLGNDPVYVWIW
LGLAKLGCVPALINHNIRAKSLLHCFSCCGAKVLIAAAELKDAVVEVLPALREQKVSVFL
LSKECDTEGIEAITEKIEKASDEPIPPALKSNLTIKSPAVYIYTSGTTGLPKAAVVNHER
MWLASFMQTLAGVRADDIIYVYLPLYHTAGFLMGLTGAIDQGITVVLRRKFSASQFWNDC
RKHNVTVIQYIGEIMRYLCNTPKKDNDRTHKVRLAIGNGIRVDTWSEFLQRFGNIHICEC
YGATEGNTGFVNYVGKVGATGRVLSLQKRFQPFALIKYDTERGEPVRDSRGLCVEVPTGE
AGLLVAKITKRAPFIGYANNNQQTEKKRLRDVLEKGDLYFNSGDLLRMDEEGFIYFQDRI
GDTFRWKGENVATTEVTDVLVILDFIEEANVYGVKVPGHEGRIGMASLKITEGMEFNSTA
TYDHLKAYLPSYARPRFIRIQSSIVVTGTYKQMKVKLAEEGFDPSVIDEVMYILEEGKGY
IPMTKDIYTAISEGSMRL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcatatttactcttttagcgggcttggcaattttgccatttttggtgtacgtt
cgctttccatatttcctacacgatttacggtacatacttaatggtattgctcttgggaaa
cgagttggaaaatactcttctagaaagccctgctacaccatcctggaccgttttcttgag
agggtcaatttacacccgcacaaaagtttcatcattttcgagaatgatacgtattcttac
caagacgccgacaggcgaagtaacaaagttgccaggaccttgtcgcagcattgcaaactt
caagagggggacgcagttgccctgttccttggaaacgacccggtttatgtatggatctgg
ttgggtttagccaaacttggatgtgtacccgcacttataaatcataacataagggcgaaa
tccttgttgcactgtttctcttgttgtggcgcaaaggtgctcattgcagctgctgaactg
aaagacgctgttgtggaagttcttccagcactgcgagagcagaaggtctcagtgttcctc
ctcagcaaggagtgtgacacagaggggatagaagccatcacagaaaagatcgagaaagcc
tctgatgagcccataccaccagctctgaagtcaaacctgaccattaagagtcctgccgtg
tatatttacacctctggaacaacaggtcttcccaaggcagctgtggtaaaccatgaacga
atgtggctggccagtttcatgcagactttggcaggtgtacgggcagatgacatcatatat
gtttacctccctctgtatcacactgctggattcctgatgggactaacaggagctatagac
caaggtataacagtggtcctgagacgcaagttttcagcatcacagttctggaatgactgc
agaaagcataatgtgactgttatccagtatataggtgaaataatgcgctacctctgcaat
acaccaaagaaagacaatgacagaacccacaaggtcagattagccattggcaatggaatc
agagtcgatacatggtcagagtttctacagcgctttggcaatatccacatctgtgagtgc
tacggtgccactgagggaaacactggctttgtgaactatgttggtaaagtcggggcaact
ggacgggtgctctcactacagaagaggttccagccattcgccctgattaaatatgacacg
gagagaggagagccagtgagagactccagaggcctctgtgtagaagtgccaacaggggag
gctggccttctagtggcaaaaatcaccaaaagggcccctttcattggctatgccaataac
aaccagcagacagagaagaaaagactgagggatgttttagagaaaggggacttgtacttc
aacagtggagaccttctcagaatggacgaggaagggttcatctactttcaggatcgaatt
ggagataccttcagatggaagggagagaacgttgcaaccactgaagttaccgatgtactt
gtcatcctggattttatagaggaagccaatgtgtacggtgtcaaagtcccaggccacgaa
ggaaggattggaatggcatcattgaaaataactgaaggaatggagtttaacagcactgct
acctacgaccacttgaaggcctaccttcccagctatgcaagacctcgatttatcaggatc
cagagttccattgttgtgactgggacctacaaacagatgaaagtcaagcttgccgaagag
ggatttgatccatctgttattgacgaggtcatgtatatcttggaagagggcaagggctac
atccccatgactaaggacatttatactgcaatcagcgagggaagtatgaggctgtga
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