Clupea harengus (Atlantic herring): 105889040
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Entry
105889040 CDS
T09045
Symbol
chsy3
Name
(RefSeq) chondroitin sulfate synthase 3
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
char01100
Metabolic pathways
Module
char_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
105889040 (chsy3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105889040 (chsy3)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
105889040 (chsy3)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
105889040 (chsy3)
Glycosyltransferases [BR:
char01003
]
Glycan extension
O-Glycan
105889040 (chsy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Glycos_transf_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
105889040
NCBI-ProteinID:
XP_012670254
Ensembl:
ENSCHAG00000012332
UniProt:
A0A6P3VFQ4
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Position
12:complement(12328684..12419495)
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AA seq
858 aa
AA seq
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MTLFRRITATYLYISEELRIVHPFLKLSAIYCTVSTMAVRSRRPWMSVIVGVVLGFTAAS
WLIVPRVMEISGKKRRSSMCSYYSNSVNIAKVPEVHGSTATSNAWRKDPESPLSSQEGSE
EEEESVYRTGNGSGDGGGPIARPKHFLFVGVMTAKKYLDSRAVAAYRTWTRSIPGKVEFF
SSEGSETVPLPSPLPVVSLAGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIR
GEKLESFLRSLNSSKPLYLGQTGLGTTEELGKLALEPGENFCMGGPGMIFSREVLRRMVP
HIRTCLREMYTTHEDVEVGRCVRRFGGTQCVWSYEMQQLFYENYEHNKKGFIQELHNSKI
HNAITLHPNKRPAYQYRLHSYMLSRQISQLRYRTIQLHREGITMSKLGNTEVQWEDQQLG
APPSYTRYQPVERNNVIEWDFLTGRHLYATGEKQMPRQGLGNLLRTALEDTVMQVMEMIN
ENSKARGRVIDFKEIQYGYRRVDPLHGAEYILDLLLLYKKHKGRKVTVPVRRHAYLQQSF
SRPFFTEAEELDVTELVDAINTESQSFSFLSNSLKIFSPFQLPDSTKEMRERNQHKVHIL
VPLTGRYDTFVRFMDNFERTCLLPSQNVKLTVILVDNDSNQDREKHLDLIKEYHNKYPKG
DLSVIPMTGDFSRGLALELGSSLLSNNSLLFFCDVDLVFNTDALQRCRDNAIQGSQAYFP
VVFSQYDPKIVYAGSPPEDSNFVFTKKSGFWRDYGFGITCIFKSDLQMAGGFDTSIQGWG
LEDVDLFTKVINSGLKAFRSQEPGIVHVYHPVHCDTNLEPKQYKMCLGSKASTYASTMQL
AELWLEKHLGVGYNRTSS
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgacactctttcgacggattacggctacatatctttacatatctgaggaacttcgcatc
gttcacccttttctcaaactgtcggcaatctattgtactgtttctaccatggctgtcagg
tccaggagaccatggatgagcgtaattgttggggtagttcttggatttacagctgcttcg
tggctgattgtcccaagggtgatggagattagtggcaagaagaggcggtcctccatgtgt
tcttactacagcaattctgtgaatatagccaaagttccagaagtacacggtagcaccgca
acgagcaatgcgtggcgcaaagacccggagagccctttatctagtcaagaaggaagcgag
gaagaggaggaaagtgtctaccggacaggcaatggaagcggggacggcggaggacctata
gccagacctaagcatttcctcttcgtcggtgtcatgacagccaaaaagtaccttgattca
cgagcagttgcggcgtataggacgtggactcgttccatcccggggaaggtggagtttttc
tccagtgaaggctcggaaacggtcccgctgccaagtcccctccccgtggtatcgttggcc
ggagtggacgactcataccctccccaaaagaaatcctttatgatgcttaaatacatgcac
gaccattacttggataaatacgaatggttcatgagggcagatgacgatgtctacattcga
ggagaaaagctggagtccttcctgaggtcgctgaacagcagcaagcccctgtacctgggc
cagacgggcctcggcaccacggaggagctgggaaagctggcactggagcccggggagaac
ttctgcatgggcggccccggcatgatcttcagccgggaggtgctgcgcaggatggtgccc
cacatccgcacctgcctgcgggagatgtacaccacccacgaggacgtggaggtgggccgc
tgcgtgcgacgcttcgggggcacccagtgcgtctggtcctacgagatgcagcagctgttc
tacgagaactatgagcacaacaagaagggcttcatccaggagctgcacaacagcaagatc
cacaacgccatcacgttgcatcccaacaagcggcccgcctaccagtaccggctccacagc
tacatgctcagccggcagatctcccagctgcgctaccgcaccatccagctgcaccgcgag
ggcatcaccatgagcaagctgggaaacacggaagtgcagtgggaggaccaacagctgggg
gcgccgccttcctatacccggtaccagccggtggagcgcaacaacgtcatcgaatgggac
ttcctgaccggtcggcacctgtatgccaccggggagaagcagatgccacggcagggcttg
gggaacctcctccgcaccgccctggaggacacggtcatgcaggtgatggagatgatcaac
gagaactccaaggcccgcggacgggtcatcgacttcaaggagatccagtacggctaccgg
agggtggacccgctgcacggcgccgagtacatcctggacctgctgctgctctacaagaaa
cacaagggccgcaaggtgacggtgcccgtgcggcggcacgcctacctgcagcaatccttc
agccggccgttcttcactgaggcggaggagctggacgtgaccgagctagtggacgccatc
aacaccgagtcgcagtccttctccttcctctccaactcgctcaagatcttctcgcccttc
cagctgcccgactccaccaaagagatgcgcgagcggaaccagcacaaggtccacatcctg
gtgcccctaacagggcgctacgacacctttgtgcgcttcatggacaactttgagaggacg
tgcctgctgcccagccagaacgtcaaactgacggtcatcctcgttgacaacgacagcaac
caggaccgggagaagcacctggatctgatcaaggaataccacaacaagtaccccaaagga
gacctctcagtcatccccatgacgggagacttttcccgaggtctggctctggaattggga
tcctccttgctgagcaacaacagcctgctgttcttctgcgacgtggacctggtcttcaac
actgacgcccttcagcgctgcagagacaatgccatccagggaagccaggcctacttccct
gtcgtcttcagccagtatgaccccaagattgtctacgccggaagcccgccggaggacagc
aactttgtcttcaccaagaagagcggcttctggagggactacggcttcggtatcacctgc
attttcaaaagtgacctgcagatggccgggggctttgacacctccatccagggctggggc
ctggaggacgtggacctcttcaccaaggtgatcaactcaggcctcaaggccttccgcagc
caggagccaggcatcgtccacgtgtaccacccggtccactgtgacacgaacctggagccc
aagcaatacaaaatgtgcctcgggtcaaaggcgagcacgtacgcctccaccatgcagcta
gcggagctgtggctggagaagcatctgggcgtgggctacaacagaacttcctcttga
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