Clupea harengus (Atlantic herring): 105889051
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Entry
105889051 CDS
T09045
Symbol
rnf34b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105889051 (rnf34b)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105889051 (rnf34b)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105889051 (rnf34b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
HeH
SAP
zf-C3HC4_2
Prok-RING_4
FYVE
DUF4518
zf-C3HC4_4
zf-RING_5
BUD22
DUF4746
NatA_aux_su
Lin-8
Motif
Other DBs
NCBI-GeneID:
105889051
NCBI-ProteinID:
XP_031434079
UniProt:
A0A6P8G4A6
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All DBs
Position
12:complement(7242775..7263232)
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AA seq
442 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGTMRPPGGQAGFGAGARPFRFAPSGGYSTYPPATPSSS
SSAPASAGLACKACGLAFSVFRRKHVCSDCRKSFCSLCSVLQENLRRCATCHLLWGTAFR
RPLLMRLRVKDLRQYLTLRNIPTDTCREKEDLVELVLCTLGPRPRIGEVEEEEEEQEQEE
EVRGSEEEKKEMEERKEGEGQEQREVKEEHEEEEEEEEEEEEEEEDGERLRVLLTSPQSV
SEHSELSITASQEDTPSPSDSSGTSSQDQGDAASLSLQNLENRSSIQEASPATQRSARAS
LSDIANEGAIESLTVRQLKEILARNFVNFSGCCEKWELVERVHRLYRENEQNRRSMENVS
SDITAVMTYPPPICLREVGDGVTRPQLSAVDENLCRICMDALIDCVLLECGHMVTCTKCG
KRMNECPICRQYVVRAVHVFKS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggcgcctcctccatgtgggcctcctgctgtgggttgctgaatgaggtgatg
ggcacggggaccatgcggccgcctggcggacaggcggggttcggtgcgggcgccaggccc
ttccgcttcgcccccagcggcggctactccacctacccccccgccacgccctcctccagc
agctccgcccccgccagcgccggccttgcctgcaaagcctgcggactcgccttctccgtc
ttcagaaggaagcacgtgtgttcagactgcaggaagagtttctgttcgctgtgctcggtt
ctgcaggagaacctgcgccgctgtgccacgtgtcacctgctctggggcacggccttccgg
cggccgctgctcatgcgcctgcgtgtcaaggacctgcgccagtacctgacactgcgcaac
atccccactgacacctgcagggagaaggaggacctggtggagctggtactgtgcaccctg
ggcccccgtccacgcatcggggaggtggaggaggaggaggaggagcaggagcaggaagag
gaggtgcggggtagtgaggaggagaaaaaagagatggaagagaggaaggagggagaagga
caggagcagcgggaggtaaaagaggaacatgaggaggaggaggaggaggaggaggaggag
gaagaggaggaggaggatggggagagactaagggtgctcctgacctccccccagtcagtc
tcagagcactcagaactgtccatcacagcttcacaagaggacacaccaagccccagcgat
agctcaggcaccagcagccaggaccaaggagatgctgcctccctctccctacagaacctg
gaaaaccgcagcagcatacaggaggccagtccggctactcagaggtctgcccgagcctcc
ctctcggatattgccaacgagggcgccatcgagagcctgacggtgcggcagctgaaggag
atcctagcgcggaacttcgtcaacttctctggctgctgcgagaaatgggagctggtggaa
cgtgtgcaccggctctaccgcgagaacgagcagaaccgcagatccatggagaatgtgagc
agtgacatcacagcagtaatgacgtacccccctcccatctgcctcagagaagtcggagat
ggggtgacgaggcctcagctgagtgctgtggatgagaacctgtgtcgtatctgcatggat
gcgctcatagactgtgtgctgttggaatgcggccacatggtcacctgcaccaagtgtggc
aaacgcatgaacgagtgccccatctgcaggcagtatgtggtgcgcgccgtgcacgtcttc
aagtcctaa
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