Clupea harengus (Atlantic herring): 105889069
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Entry
105889069 CDS
T09045
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105889069 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105889069 (lrrc4cb)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
NGL family
105889069 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
I-set
Ig_3
LRR_9
Ig_2
ig
LRRNT
V-set
Podoplanin
Insulin_TMD
Syndecan
Motif
Other DBs
NCBI-GeneID:
105889069
NCBI-ProteinID:
XP_031425538
Ensembl:
ENSCHAG00000000256
UniProt:
A0A6P8FAH7
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All DBs
Position
6:complement(29094478..29116603)
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AA seq
629 aa
AA seq
DB search
MLNKMTSYHWNQMMRGSRWKGALSDPLFVLLLLLQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGVSTNTRYLNLQDNLIQVIKVDSFKHLRHLEVLQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNAAFEYLSKLKELWLRNNPIESIHAYAFNRLPSLQRLDL
GELKRLSYVSQAAFKGLSNLRYLNLGMCNLKEIPNTVPLERLEELELSGNQLSVLQPGSF
RGLANLKRLWMMHAQIQTIERNSFDDLQSLIELNLAHNNLTLLPHELFNPLQRLERVHLH
HNPWNCNCDILWLSWWLKEVAPANVSCCARCYSPVNYRGRYIGDLDQSYFQCHAPIIAEP
PSDLNVTEGMPAELRCGTNTWTAITWQTPNGSIINVGAVPSRISILNDGTLVFSNVSLWD
IGRYTCLVVNMAGNTSASAFLNVTSIENSGVTYFTTVTVETIESPNDEGRTPVQPANSWA
SSSTTRGTPVATERAYTIPVTDIDAESVDGLDEVMKTTKIIIGCFVAITLMAAVMLIIFY
KMRKQHHLQDPDGPTQTIEIINVDDELTGIPSLENHLTLPPLGHDHYNHYNTYKTPYHHG
HTISSLHTSAHEPLLIQASSKDNVQETQI
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttaccattggaaccagatgatgagaggttctagatggaaa
ggagccttgtctgaccccctcttcgtgctgctgttgctgctccagttgttggtggtggcc
gggttggtcagagcccagacctgcccttcggtgtgctcctgcagcaaccagttcagcaag
gtcatctgcacacgccgaggattgcgagacgtgcctgatggcgtatccacaaacactcgt
tacctgaacctccaggacaatctcatccaggtcatcaaagtggacagtttcaagcacttg
cgccacctcgaggtcctgcagctcagcaagaaccacatccgaagcatagagataggggct
ttcaatggactcgccagtctcaacacactggagcttttcgacaatcgccttactactatt
cccaatgcagcctttgagtatctgtccaagctgaaggagctgtggctgagaaacaacccc
atcgagagcatccatgcttatgccttcaatcgactcccctccctgcagaggctggacctg
ggcgagctcaagcggctctcctacgtctctcaggcggcttttaaaggcttgagcaatctg
cgctatcttaacctgggcatgtgtaacctgaaggagatccccaacaccgtgcccttggag
cggctggaggagctggagctgtcggggaaccagctctcggtgctccagccaggctccttc
cgggggctcgccaacctgaagaggctgtggatgatgcacgctcagattcagaccatcgag
agaaactccttcgatgacctgcagtcgctgatcgagctcaacctggcccacaataacctc
accctcctcccacacgagctcttcaaccccctgcagcgcttagagcgggtgcatttacac
cacaatccttggaattgcaactgcgacatactttggcttagctggtggctaaaggaggtg
gcgccggctaatgttagctgctgtgcccgctgctactcaccagtcaactacagaggacga
tacatcggagaccttgaccagagctattttcaatgtcatgctcctatcatagcagagcca
ccctcagaccttaatgtgacagaggggatgcctgcagaacttagatgcggaacaaataca
tggaccgcaatcacctggcagacaccaaacggttcgataataaatgttggggccgtcccc
tcaagaatctccattctcaatgacgggacactggtcttttccaatgtttcactgtgggac
atagggaggtatacatgcctagttgtcaatatggcaggcaacacgtctgcctctgctttt
ctaaatgtgacgtccatagagaacagtggcgtcacctacttcaccacggtcactgttgaa
actatcgagtcaccaaatgatgagggcaggaccccagtgcagccagccaatagctgggcg
tcatcctccacaaccaggggaactccagtggcgacagagagagcctacacaatccctgtt
acggacatcgacgctgagagtgtggatggcttggatgaggtaatgaagactaccaagatt
attattggctgctttgtagcgatcactctcatggctgctgtcatgctcatcatcttctat
aagatgcggaagcagcatcacctgcaggatcccgacggccccacccagaccatagagatc
ataaacgtggacgatgagctaacggggattccctccttagagaaccatctgacactgccc
cctctagggcatgaccactacaatcattacaatacctataagactccttatcaccatggc
catacaatcagttccttgcatacttctgcgcatgaacctttactaatccaagccagctca
aaagacaatgtccaggagacacaaatctag
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