Clupea harengus (Atlantic herring): 105889118
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Entry
105889118 CDS
T09045
Symbol
snrpd3l
Name
(RefSeq) small nuclear ribonucleoprotein D3 polypeptide, like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105889118 (snrpd3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105889118 (snrpd3l)
03041 Spliceosome [BR:
char03041
]
105889118 (snrpd3l)
03032 DNA replication proteins [BR:
char03032
]
105889118 (snrpd3l)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105889118 (snrpd3l)
Spliceosome [BR:
char03041
]
Complex A
U1 snRNP components
Sm proteins
105889118 (snrpd3l)
U2 snRNP components
105889118 (snrpd3l)
Complex B
U1 snRNP components
105889118 (snrpd3l)
U4/U6.U5 tri-snRNP components
105889118 (snrpd3l)
Complex C
U2 snRNP components
105889118 (snrpd3l)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105889118 (snrpd3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
ATP-grasp_2
Kringle
TSP9
Motif
Other DBs
NCBI-GeneID:
105889118
NCBI-ProteinID:
XP_012670345
Ensembl:
ENSCHAG00000005448
UniProt:
A0A6P3VFL8
LinkDB
All DBs
Position
12:complement(5033480..5037440)
Genome browser
AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNSGEVYRGKLVEAEDNMNCQMANLTVTHRDGRVSQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQAAGAGRGKAAILKAQVAARGRGRGGGGRG
NIFQKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcggcgtacccataaaagttctgcatgaagcagaaggacacattgtcacatgc
gaaaccaacagcggagaagtgtacagaggaaagttagtagaagcggaggacaacatgaac
tgccagatggccaatctcacggtgacgcaccgagatggcagggtgtctcagctggaacag
gtctacattcggggcagcaaaatccgcttcctcattctgccggacatgttgaagaacgcg
cccatgttgaaaagtatgaagaacaagaaccaggccgctggagctggcagagggaaagct
gccatcctcaaagcacaagtggctgcaagaggtcgtggtagaggaggaggtggcagaggg
aacatcttccaaaagaggcgatga
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