Clupea harengus (Atlantic herring): 105889124
Help
Entry
105889124 CDS
T09045
Symbol
usp10
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 10 isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105889124 (usp10)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105889124 (usp10)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105889124 (usp10)
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105889124 (usp10)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105889124 (usp10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
PAM2
Motif
Other DBs
NCBI-GeneID:
105889124
NCBI-ProteinID:
XP_012670353
Ensembl:
ENSCHAG00000024908
UniProt:
A0A6P3VFQ7
LinkDB
All DBs
Position
6:24092788..24120093
Genome browser
AA seq
881 aa
AA seq
DB search
MASRSNQYIFGEFSPDEFNQFFVTPRCFVELPPFNDKVSCISHSSGSYCTPAVPYITESM
RRQVCGEDFQHIEFGVDEVMDSEPVGVNPMYKVSSTLNPQAPEFILGCQPSQKAMPTAMP
EPDVPDGTDFNSMDCQDSEPSAMDSAQACQEMDGMGGSLGQRERKKKKKRPPGYYNYLEG
SGGSHSSGAMSDGPLSSGLVNGHSLGTPSLTSEDTSPEGLSGAELGTPSPTTTPSVASAT
TTTTPTAAPAHQRTCASPDESGADESGAASSSSDGNNAASSSSSSSSSSSQSGAVADGRR
TAEQPAERPELLVGGGHSPCPTSPPPLLADAASPLAAATAATTEEKEEEVTDSGVANGLA
GPGSADGHEDDSGAGAPQSSPALAVPPAGAQPLAEQPAAPAAPTAPVAPSANPPKSWASL
FKNSKPLPGGPQAYVEVKNVPAVTASSPAAAEVPEKAGEVRESPVPMSEDPMAPKLAELI
ENVKLIHKPVSLQPRGLINKGNWCYINATLQALIACPPMYHLMKSIPLFSETQRPCTSTP
MMDNFVRLVNEFSNMPVPSKAKLQGAGEKVIKDIRPGVPFEPTYIYRLLTLIKSSLSEKG
RQEDAEEYLGFTLNGLHEEMLALRKLISPTEEKESTPNGPDSQQGLADESAEKDEEEGSD
DEWEQVGPRNKTSITRQTDFIRTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS
EKIRTVQEALETLVARESVQGYTTKTKQEIEISRRVTLEELPPVLVLHLKRFVFEKTGGC
QKLVKNIDYPVDLEISKDLLSPGVRGKIFKGQRTYRLFAVVYHHGNSATGGHYTTDVFHI
GLNGWLRIDDQAVKVINQYQVVKQTAERTAYLLYYRRVDLL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcgcagtaaccagtatatttttggggagttcagcccagatgaattcaatcaa
ttctttgtgactccccgctgttttgtggagcttcccccattcaatgataaagtgtcctgc
atcagccactcctcaggaagttactgcactcctgctgtgccttacattacggagtcaatg
agacggcaggtttgcggggaagacttccagcacattgagtttggcgtggacgaggtgatg
gactctgagcctgtcggggttaatcccatgtacaaagtgtccagcaccctgaacccccag
gccccagagttcatcctgggctgccagccttcccagaaggccatgcctacagccatgcca
gagccggacgtccccgacggcacagacttcaactccatggactgccaggactctgagccc
tctgctatggacagcgcccaggcctgccaggagatggacggtatgggtggcagcttgggt
cagcgtgagcgcaagaaaaagaaaaagcgcccgccgggatactacaactacctggagggc
tcgggcgggagccacagcagcggtgcgatgtcggatgggcccctgagctcgggattggtg
aacggacactcgctcggcacccccagcctgacctcggaggacacgagccccgaggggctg
tcaggggctgaacttggcaccccgagtccgaccaccacccccagtgtagcctccgcgacc
accaccaccacacctacagcggctcctgcccatcagaggacttgtgccagccctgatgaa
tctggggctgatgaatccggggctgcctcctcctcctcagacggcaacaacgctgcctcg
tcgtcgtcgtcctcctcttcctcctcctctcagagtggcgcagtggcagatgggcgcagg
actgcagagcagccggccgagaggcctgaactgctggtgggcggtgggcacagcccctgc
cccacctccccaccccccctgctggctgatgcagccagcccccttgcagctgccactgcc
gctactactgaagagaaggaggaggaggtcacagacagtggggtagccaatgggctggct
gggcccggctctgcagatggacacgaggatgactccggggcaggggcgccacagagctcc
cccgccttagcagtgccccctgctggtgcccagccactggcggagcagcctgctgcgcca
gcggcaccaactgcgccagtggcaccctctgccaacccgcccaagtcctgggccagcctt
ttcaagaactccaagcctctgccagggggcccgcaggcctacgtggaggtgaagaacgtg
cctgcagtgacggcttcgtctccggctgcagctgaggtgcctgagaaggctggagaggtc
cgggagagccctgtccccatgtcagaggacccaatggcccccaaactggcagaacttatt
gagaatgtgaaattgatacacaaaccagtgtctttgcaacccagaggactgatcaacaag
ggaaactggtgctatatcaatgctaccttgcaggccctgattgcatgtccccccatgtat
catctgatgaagtctatccccttgttcagtgaaacccagagaccatgcacatcgacaccc
atgatggataactttgttcggctcgtgaatgaattcagtaatatgcctgtgccctctaag
gctaaactgcaaggtgccggagaaaaagtcataaaagacattcggcctggtgtccctttc
gagcccacctatatttacagactcctcacactcatcaaatcaagcctctctgagaagggg
cggcaggaggatgcggaggagtacctgggattcaccctgaacggcctgcacgaggagatg
ctggcactgagaaagctcatctctccaacggaagagaaagaatcgacgccgaacggccct
gactctcagcagggactggcagacgaatctgctgagaaggacgaagaggagggcagtgat
gatgagtgggagcaagtgggccccaggaacaagacctccatcacccgccagacagacttc
atccgcaccccaatcacagacatattcggaggccacatcaggtcggtggtgtaccagcag
agctccaaggagtcggccaccctccagcccttcttcaccctgcagctggacatccaatca
gagaagatccgcaccgtccaggaagccttggagacgctggtggcacgcgagtccgttcag
ggctacaccactaaaaccaagcaagagattgagatcagccggagagttaccctcgaagag
ctgccgcctgtgctggttctccacctcaaaagatttgtgttcgagaagactggcggttgt
caaaagctggtcaagaatattgactaccctgtagatctggaaatcagtaaagatcttctg
tctcctggggtgcggggcaaaatattcaaaggccaaagaacctacaggctctttgcagtt
gtgtatcaccatgggaacagtgctacaggcggccactacactacggatgtcttccacatc
ggtctgaacggctggctgcgcatcgatgatcaggcagtgaaggtcatcaaccaataccag
gtggtgaagcagactgcggagcgcactgcctacctgctgtactaccgtcgcgttgacctg
ctgtag
DBGET
integrated database retrieval system
