Clupea harengus (Atlantic herring): 105889129
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Entry
105889129 CDS
T09045
Symbol
atp2a2b
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 2b
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04148
Efferocytosis
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105889129 (atp2a2b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105889129 (atp2a2b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105889129 (atp2a2b)
04261 Adrenergic signaling in cardiomyocytes
105889129 (atp2a2b)
Enzymes [BR:
char01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
105889129 (atp2a2b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cation_ATPase
Cation_ATPase_C
E1-E2_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
105889129
NCBI-ProteinID:
XP_031434357
Ensembl:
ENSCHAG00000008493
UniProt:
A0A6P8G500
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All DBs
Position
12:complement(5172822..5211651)
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AA seq
1042 aa
AA seq
DB search
MENTHTKTVEEVYSNFNVNESTGLSLDQVKKQKEKYGSNELPAEEGKSLWELVMEQFEDL
LVRILLLAACISFVLAWFEEGEGTITAFVEPFVILLILIANAIVGVWQERNAENAIEALK
EYEPEMGKVYRQDRKSVQRIKAKDLVPGDIVEVAVGDKVPADIRLTSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAVGVVVATAGSTEIGKIRDEMA
GTEQERTPLQQKLDEFGQQLSKVITLICIAVWLINIGHFSDPVHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFIVDKVEGAGCALKEFTVTGSTYAPEGEVFLDGKTVKSSQYEGLVEMATICALC
NDSSLDYNEAKGVFEKVGEATETALTCLVEKMNVFDTDLKGLSKIERANSCNSVVKQLMK
KEFTLEFSRDRKSMSVYCTPNKARSSVGKMFVKGAPEGVVDRCTHIRVGSNKVPMTAGIK
EKIMSVIREYGSGRDTLRCLALATRDNPPSKDQLNLQDCTRFVDYETDLTFVGCVGMLDP
PRSEVAASIKLCRLAGIRVIMITGDNKGTAVAICRRIGIFGEGEDVTHMAYTGREFDDLS
PTAQREAVLTARCFARVEPSHKSKIIEFLQSYDEITAMTGDGVNDAPALKKSEIGIAMGS
GTAVAKSASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG
FPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMSKPPRNAREPLISGWLFFRYLAIGC
YVGAGTVGAAAWWFIAAEDGPRISLYQLSHFLQCGADNPEFKDVACEVFESPYPMTMALS
VLVTIEMCNALNSVSENQSLLRMPPWENVWLLGAICLSMSLHFLILHVEPLPMIFQITPL
DLTQWLMVLKISLPVILLDEVLKFASRNYLDPPKELEEEKSSGCSLGACLEGISWPFVAF
SLPMLIWLYSTDTNLAELFYSS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagaacactcacacgaagacagtggaggaagtttacagtaacttcaatgtaaatgaa
agcactgggctcagcttggatcaagtgaagaagcagaaagagaaatatggatctaacgaa
ctgcctgctgaggaaggaaaatctttatgggagcttgtcatggagcagtttgaagactta
cttgtgaggattctgcttctagcagcctgcatatcttttgtgctggcctggttcgaggag
ggcgaggggaccatcaccgccttcgtggagcccttcgttatcctgctcatcctcatcgcc
aacgcaattgttggtgtgtggcaggaacggaatgcagagaatgccattgaggcgctgaaa
gagtacgagccggagatggggaaggtgtaccggcaggatcgcaagagtgtgcaacgcatc
aaggccaaagacctcgtccccggagacatcgtggaggtggctgtgggtgacaaagttcct
gccgacatccgcctcacttcaatcaagtccaccacgctccgggtggaccagtccattctg
acaggagagtcagtttcagtcataaagcacactgaccccgtgcctgacccccgcgcagtc
aaccaggacaagaagaacatgctcttctccggtaccaacattgccgcgggcaaggcggtg
ggcgtggtggtggccacggccggctccacggagatcggcaagatccgcgacgagatggcg
ggcacggagcaggagcgcacgcctctgcagcagaagctggacgagtttggccagcagctg
tccaaggtcatcacgctcatctgcatcgccgtgtggctcatcaacatcggccacttcagc
gaccccgtgcacggaggctcctggatccgcggtgccgtctactacttcaagatcgccgtg
gcactggctgtcgccgcgatccctgaaggtcttccggctgtcatcaccacctgcctggct
ctgggcactcgtcgcatggccaagaagaatgccattgtgcgctcactgccctctgtggaa
acactgggttgcacctctgtcatctgctcagacaagacaggcacgctcaccaccaatcag
atgtctgtctgcaggatgttcattgttgacaaagtggaaggagccggttgcgccctgaag
gagtttaccgtcactggatccacctacgcccctgagggagaagttttccttgatggcaag
acagtcaagtcttcccagtatgagggtctagtggagatggccaccatctgtgccctgtgc
aatgattcatcgctggactacaatgaggccaaaggagtgtttgagaaggtgggagaggcc
acggagacggccctcacctgcctggtggagaagatgaacgtgtttgacaccgatctcaaa
ggcctgtcgaagatcgagagggccaactcctgcaattctgtggtgaagcaactgatgaag
aaggagttcacactggagttttcccgcgacaggaagtccatgtctgtgtactgcactccc
aacaaagcccgctcatccgttggcaagatgtttgtgaagggagctccagagggtgttgtg
gaccggtgcacacacatccgcgtgggaagcaacaaggtgcccatgaccgccggcatcaag
gagaagatcatgtccgtgatccgggagtacggctccggccgcgacacgctgcgctgcctg
gccctggccaccagagacaacccccccagcaaggaccagctcaacctacaggactgcacc
cgcttcgtagactacgagacggacctgacgttcgtgggctgcgttggcatgctggaccca
ccgcggtccgaggtggccgcctccatcaagctgtgccgcctggcgggcatccgcgtcatc
atgatcaccggcgacaacaagggtacggccgtggccatctgcaggcgcatcggtatcttc
ggcgagggcgaggacgtgacacacatggcctacacgggccgcgagttcgacgacctgtcg
ccgaccgcccagcgcgaggccgtgctcacggcccgctgctttgcccgcgtcgagccctcg
cacaagtccaagatcatcgagttcctgcagtcctacgatgagatcaccgccatgactggt
gatggtgtgaatgacgcacctgcgctcaagaaatccgagattggcattgccatgggttcc
ggtactgccgtagccaagtctgcctcagagatggtgctggccgacgataacttttccacc
attgtggcggctgtggaggagggccgggcaatctacaacaacatgaagcagttcatccgc
tacctcatctcctccaacgtgggagaggtcgtctgcatcttcctgacggcggcgctgggc
ttccccgaggctcttatcccggtgcagctgctgtgggtgaacctggtgacggatggcctg
cccgctaccgccctgggcttcaacccccccgacctggacatcatgagcaagcccccccgc
aacgcccgcgagcccctcatctctggctggctgttcttcagataccttgccatcggatgc
tatgtgggtgccggtactgttggagctgctgcctggtggttcattgctgctgaggatgga
cccaggatttccctttaccagctgtcccacttcctgcagtgtggggctgataaccctgag
tttaaggacgtggcctgtgaggtctttgagtcgccctaccccatgaccatggccctgtct
gtgctcgtcaccatcgagatgtgcaacgctctcaacagtgtgtcggagaaccagtctctg
ctgaggatgcccccatgggagaacgtgtggttgctaggcgccatctgtctgtccatgtcc
ctgcacttcctcatcctccacgtggagcctctgccgatgatcttccagatcacacccctc
gacttgacccagtggctgatggtgctgaagatctctctgcctgtaatcctgctggacgag
gtgctcaagtttgcgtcccgtaactacctggatcccccgaaagagctggaggaggagaag
agcagcggctgctcgctgggcgcctgtctggagggcatctcctggcccttcgtggccttc
tccctgcccatgttgatctggctctacagcactgacacgaacctggccgagttgttttac
tcctcctga
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