Clupea harengus (Atlantic herring): 105889148
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Entry
105889148 CDS
T09045
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105889148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105889148
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105889148
Membrane trafficking [BR:
char04131
]
Endocytosis
Macropinocytosis
Sorting nexins
105889148
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
105889148
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
FAM92
Motif
Other DBs
NCBI-GeneID:
105889148
NCBI-ProteinID:
XP_012670394
Ensembl:
ENSCHAG00000026760
UniProt:
A0A6P3VF62
LinkDB
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Position
6:25339512..25354322
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AA seq
520 aa
AA seq
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MEASTERNPPPFPEPMDREINSDKLEEESDDEGEDIFTGSIKSTSSTPVNHMPTDIFTEE
GSGPTPQSHIVPQHDTNGLRSDEEQDLFAEATVELSIDKVNNRERKEISRPNPSIQDIPY
KPSVANKSLEEWEEEESRDKFELNIAVTNPEKVGDGMNAYMAYKVSTQTTLPMFKSTTFS
VMRRFSDFLGLYEKLLEKHSHHGYIVPPPPEKSVMGMTKVKVGKEDHSSGEFVERRRAAL
ERYLKRVVSHQSLLQDPDVREFLEKDELPRAVSTQALSGAGFLKMINKASDAVNKMTIKM
NESDNWFEEKFQEVENEEQQLRKLHAVVDALVNHRKELCVNTAVFAKSMAMLGTSEDNTA
LSRALSQLAEVEDKMEQLHQEQACSDFFLLAELLADYIRLLGAVRNSFDHRMKTWQKWQD
AQNTLQKKREVEAKLLWANKPDKLQQAKEEITEWEAKVTQYERDFERICTTVRQEVLRFE
KEKARDFKIHIVKYLESLLLSQQRLIKYWEAFLPEAKAIV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaggctagcacagagcgtaatccaccgccattccctgagcctatggaccgtgaaata
aattcggataaattagaagaggaaagtgacgatgagggtgaagacattttcactggcagt
attaaatccacctccagcaccccagtaaaccacatgccgacagacatcttcactgaagag
ggatccggcccaactccacagtcccacatagtgccccagcatgacacgaatggcctgcgt
tctgacgaggagcaagatctgtttgcagaggcaactgtggagttatccattgacaaggtt
aacaacagagaaagaaaggaaatctcaaggccaaacccttctatacaggacattccttac
aagcctagtgtggcaaacaaatcattggaagagtgggaagaggaagagagtagagacaag
tttgagttaaacattgcagtgactaatcccgagaaagttggagatggcatgaatgcgtat
atggcttataaagtgtctactcagaccactctacccatgttcaagagcaccacattttct
gtgatgagaaggtttagtgatttcctgggtctctatgagaagctcttggagaagcactcg
caccatgggtatattgtgcctccacccccggagaagagcgttatgggtatgactaaagtc
aaagtggggaaagaagatcactcctcaggcgagtttgttgagcggcggagagcagcactg
gaaaggtacctgaagagagttgtgtctcaccagagcttgctgcaagacccagatgtcagg
gagtttttagagaaagatgagttacctagggcagtgagcacacaagcactgagtggagct
ggcttcctaaagatgatcaacaaagcgtcagatgcagtcaacaaaatgacaatcaagatg
aatgagtctgacaattggtttgaggagaagtttcaggaagtggagaatgaggagcagcaa
ctaagaaagctccatgcagtggtggatgctcttgtcaaccacagaaaagaattgtgtgtg
aacacggctgtgtttgcaaagagtatggcaatgctgggaacctctgaagacaacacggcc
ttatccagagctctgtcccagctagcagaggtggaagacaagatggagcagctgcaccag
gagcaggcctgcagtgacttcttcctcctggcagagctgctggccgactacatacggctg
ctaggagccgtgcggaattcgtttgaccatcgaatgaaaacttggcagaagtggcaggat
gcgcagaacaccttgcaaaagaagcgagaggttgaggcaaaacttctgtgggctaacaag
cctgacaaattacaacaagcaaaagaggagattacagagtgggaggcaaaagtcacccaa
tatgaaagagactttgagaggatctgcacaacagttcgccaagaggtactcaggtttgag
aaagaaaaggcaagggatttcaaaatccacatcgtaaagtatctagagtctctcctgctc
tctcaacaaaggctcatcaagtactgggaggcattcctacctgaggcaaaggcaattgta
tga
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