Clupea harengus (Atlantic herring): 105889184
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Entry
105889184 CDS
T09045
Symbol
rereb
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105889184 (rereb)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
105889184 (rereb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105889184
NCBI-ProteinID:
XP_031424200
Ensembl:
ENSCHAG00000008754
UniProt:
A0A6P8FL27
LinkDB
All DBs
Position
5:26814888..26829689
Genome browser
AA seq
1262 aa
AA seq
DB search
MDDLFSPRRQLNSTQGEIRVGPSHQAKLPELQPPPASGAETVTEIEELVWMPGVNDCDLL
MYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESHYDATKALQCLVKKPV
PKLIEKCWSEDEVKRFIKGLRQYGKNFFRIRKELLPNKKTGELITFYYYWKKTPEAVGLR
PYRQHRRQTASRRVKTRNSATNTPSRTPSMELSSASEDDLDSEDSENSLKGSFCQHCNST
TSKDWHHGGRENILLCTPCYTHLNKHRRLPPLPKPADPPFMFKPVKEEEEEEEEDGGGRH
GMKTRRSRAPMSSLRSGRKRMTGSPDGKVSPNEELRKRISPDGRTSPNEYPPSRGQTPCR
ENSSTLATRTSNTESKNNTQKATKKGKVETPLTKGAKRPREDATQDRDENETKASKRSKT
QEGPDSLSEGEGEGEVESSDSRSAQDEGSSDAKDIDQDNLSSSPSLPSPLQGNESDSDTP
TLLQPVAMATTNPYNPPGPLPPTPAQSAVQAPAQCQRGPSPGVLVPPFQHLSPPTCPPRP
PTFCVPSHAAAPEQPRVSHTVSGPFHLLQGPPFPSHQHSSEAHPSLQSLPPAPPQPQAFA
NRFPPPVRQPLSPSAVQIRPPPTTPIAHSHKPPPHVPSATPPFMQIPANLPPPPALKPLA
SLPTQHPPCAQPPPLQIMPQPLALQTHPTQPPLLAQSQCHLVKAGHGPPAPLPHHPSFLP
HRPHHPDLSSNSPSFSLSSASQCSSVSIPALQSGAHASSAVGGPMPSLHMQIKEEPMDDS
FEDCDSPPPVRRSPSPEPTVVNTPSHASQSARFIKLLDRGYNSCSRTDLCFTPLASSKLA
KKREENERSRKESEQNARQREKERERERERREERGERNTDKLSRASSSSQDGRVIESPVP
AHAHGHHMRPHFETPPPTTVAAVPPYIGPDTPALRTLSEYARPHVMSPNNRNHPFFMPLG
PGDPLLAYPMAGLYSNDPALRERELRDLREREIRERMKPGFEVKPPELEAPGLHGASASA
MEHFARHGTLSLPHMAAAAVAAAAAAGAPHPYAQFHPMVGAALERERLERERLQRPEMSY
AERLTHERLHAERMASVAANDPVARLQMLNVTPHHHQHSHVHSHLHLHQQESLAQVGCAC
MCLLGGGPHPLADHLAAGPHLGRFPYPPGSVPNALLSELPHEHEMLRHPLFGVAYPRELQ
GALPPAMSAAHQLQAMQVQSAELQRLALEQQWLHGHHHLHGAPLPGQEDYYSRLKKEGDK
QS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttgttcagtccaagaaggcagttgaacagcacacagggcgagatcagagtg
ggaccaagccatcaggccaagcttccagagctccagcctcctcctgcttctggtgcggag
actgtgactgagattgaagagcttgtatggatgcctggagtcaatgactgcgacctgctc
atgtacctaagagcagccaggagcatggcagcctttgccgggatgtgtgacggaggctcc
actgaggatggttgcttagcagcctcccgtgatgatacaacactaaatgctttaaatacg
cttcacgagagtcactatgatgccacgaaagccctccagtgtttggttaagaaaccagtg
cccaaactgatcgagaagtgctggtctgaggatgaagtgaagcgtttcattaagggcctg
cggcagtacggcaagaacttcttcaggattcggaaggagctactgcccaacaaaaaaacg
ggggaactgatcacattctactactactggaagaagactccagaggcagtagggttgcga
ccttatcggcagcaccgcaggcaaacagcatctcgcagagtcaagacccgtaactctgca
acaaataccccatctcgcaccccatccatggagcttagctcggccagtgaggatgacctg
gacagcgaggacagtgagaacagtctgaagggaagcttctgtcaacactgcaactccaca
acatccaaggattggcaccatggagggagggagaacatcctgctgtgcactccctgctac
acccacctcaacaaacaccggcggctcccccccttgccaaaaccggctgacccccccttc
atgttcaagcctgtgaaggaggaggaggaggaggaggaggaggatggtggagggaggcat
gggatgaagacgcgccgcagccgagcaccgatgtcctccttaagaagcggacgcaagaga
atgacgggaagccctgatggaaaggtgtctcctaacgaggagcttcgtaagagaatcagc
ccggatggaagaacgtcacccaatgagtatcccccatctcggggccaaaccccatgcagg
gagaactcctccactctggcaacccgaacctctaacactgagagtaagaacaacactcag
aaagccactaagaaaggtaaagtggagacaccgctgactaaaggggcgaaacgtccaaga
gaagacgctacgcaggacagagatgagaatgagactaaagccagtaaaagatcaaagact
caggaagggccagactctctgtcggaaggtgagggtgaaggtgaggttgagagctcagac
agccgcagtgcccaggacgagggcagcagcgatgccaaagacattgaccaggacaacctc
agctcctcgcccagcttacccagccctctgcagggcaacgagagtgactccgacaccccc
actctcctgcagcctgtggcgatggcaaccactaacccatacaaccccccaggccctctg
cctcccacccctgcccagtctgctgtccaggccccggcccagtgccagcgcggaccctct
cctggagtcctggtccctcctttccagcatctatctcccccaacgtgcccccctcggcca
ccaaccttctgtgtgcccagccatgctgcagcccccgagcagccgcgggtctctcacacc
gtctctggccccttccatctgctgcaagggcctccattcccttcacaccagcacagctct
gaggcccaccccagcctgcagtcccttccgccagctcccccccagccccaggccttcgcc
aaccgcttccctccccctgtgcgacagcccctctccccctctgcggttcagatcaggcct
ccacccaccacacccatcgcacattcccacaagcccccgcctcatgtccccagtgccacc
cctcccttcatgcaaatccccgctaacctgcctccgcctccggccctgaagcccctggcc
tctctgcccacccagcacccaccctgcgcccagcctccgcccttgcagatcatgccccag
ccactggcgctgcagactcaccccacacagccgcccctgctggcacagtcacagtgccac
ctcgtgaaagcgggccacggccctcctgcgcctctcccccatcacccttctttcctcccg
cacaggccccaccatccggatctctcctccaactcgccttcgttctctctctcctccgcc
tcccagtgttcctctgtgtccatcccggctctgcagtccggggcccacgcctcctctgcg
gtcggaggccccatgccttctctgcacatgcaaatcaaagaggagccgatggacgactcc
ttcgaggactgtgacagtccaccccctgtgcgtagaagcccttcgccggagccgactgtg
gtcaacacacctagccacgccagccagtcagcacggtttattaagcttcttgatcggggc
tacaactcctgctctcgaactgacctgtgcttcactccactggcctcatccaaacttgcc
aaaaaacgagaggagaacgaaaggtccagaaaggagagtgaacagaatgcccgccagaga
gaaaaagagcgtgagagggagagagagcggagagaggagaggggagaaaggaacactgac
aaactttctagagcctcgagctcttcccaggatggtcgtgtaatagagtccccggtgcca
gcccatgcccatgggcaccacatgcgcccacactttgagaccccaccccccaccacagtg
gctgccgtacccccctacattggaccggacacccctgccctgcgcaccctcagcgagtat
gcccggcctcacgtgatgtcgcccaacaaccgcaaccaccccttcttcatgcccctgggc
cctggcgatcccctgctggcctatcccatggcgggcctgtactccaacgaccccgccctg
cgggagcgcgagctccgcgacctgcgagagcgggagatccgcgagcgcatgaagccgggc
ttcgaggtgaagccgcctgagctcgaggctcccggcctgcacggcgcttccgccagcgcc
atggaacatttcgcccggcacggcacgctgtcgctcccccacatggccgccgccgccgtt
gccgccgccgccgcggccggagcgccgcacccgtacgcccagttccacccgatggtgggg
gcggcgctggagcgcgagcggctggagcgcgagcgcctgcagcggcccgagatgagctac
gccgagcggctgacgcacgagaggctccacgcggagcgcatggcgtctgtggccgccaac
gaccccgtggcgcgcctgcagatgctgaacgtgacgccccatcaccaccagcactctcac
gtccactcacacctgcacctgcaccagcaggaatcgctcgcacaagtaggctgtgcatgt
atgtgtctgctaggtggggggccccatcctctcgctgaccatctggccgccggcccgcat
ctcgggcgcttcccataccctccaggatccgtccccaacgctctcctcagcgagttgcct
catgagcacgaaatgctgcgccacccactgtttggtgtggcgtaccctcgagagctgcaa
ggcgctctgccccccgccatgtcagccgcccaccagcttcaggccatgcaggtgcaatcg
gctgagctgcagcggctggccctggagcagcagtggctgcacgggcaccaccacctgcat
ggagcgcccctccctggccaggaggactactacagtcgtctcaagaaagagggagataag
cagtcgtaa
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