Clupea harengus (Atlantic herring): 105889194
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Entry
105889194 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: mitochondrial mRNA pseudouridine synthase Trub2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
105889194
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
105889194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
PseudoU_synth_2
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
105889194
NCBI-ProteinID:
XP_012670445
Ensembl:
ENSCHAG00000006274
UniProt:
A0A6P3VFS0
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MVTPARVFRKLEGLFAVYKPSGIHWKLVRDNIEANLLKEINAAPPPAPKLEVRFQALPSG
ESGTSKALTMAAIQFPVLATSPQVRGPRYRTLKVGVGHRLDAFSSGVLVLGVGQANKALA
EFYSSAVTRDYTLEGEFGMATDDFSDTGRIIERTTFEHITLVKLEKILAMIQGGHQKALI
TYSGVDLQSQEAYQLAAQGILHPQSKSPXILKGLRCIHFKPPHFTLEAQCVNETQHYLRK
LVHEVGLELRSTAVCTGVRRTRDGLFGLQEALTRQHWTASDIQRTIKVHHSMLKDLKKAG
NSGHAEEDAQPEQHYQQTGTGEHSTASITGTGSKQLHSAAKEAAENTPSL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggtcactcctgctcgagtttttcgtaaacttgaagggttatttgctgtatataagccg
tccggaattcactggaaactcgtccgtgacaacatagaagcgaatctccttaaagaaatc
aatgctgccccacctcctgcccccaaacttgaggttcgtttccaggctctacccagcgga
gagtcaggaacatccaaggcactaactatggcagccattcagttcccagtcctcgctact
agtcctcaagtgagaggaccacggtataggaccctcaaggtgggagtgggccatcgtctg
gatgcattctcgtctggagtgcttgttctaggtgttggacaagcaaacaaggccctggca
gagttctacagctcggctgttacaagggattacacattagagggggagttcgggatggcc
acagacgacttttctgacaccggacgcatcatagaaaggactacatttgaacatatcacc
ctggtgaaactggagaagatcctggccatgattcaggggggccatcagaaagctctcatc
acatactcgggagtggacctccagtctcaggaggcatatcagctggcggctcaggggata
ctgcatccacagagcaagtctcccnccatcctcaagggtctgcgctgcatccatttcaag
cccccccacttcacccttgaggctcagtgtgtgaatgagacacagcattacttgcgcaaa
ctggtccatgaagtgggtctggagctgcgcagtactgccgtctgcacaggtgtacgacgc
acacgcgatgggctcttcggccttcaggaggcgctcacgcgacagcactggaccgcctca
gacattcagcgcaccatcaaggtgcaccactcaatgctgaaggacctcaagaaggccggc
aactctggacatgcagaagaggatgctcagccagagcagcactaccagcagacaggcaca
ggagaacactccacagccagtatcactgggactggctcaaagcagctgcattctgctgca
aaggaagcagccgaaaatacaccatccttatag
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