Clupea harengus (Atlantic herring): 105889227
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Entry
105889227 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 21
KO
K20315
Rho GTPase-activating protein 21/23
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105889227
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Others
Others
105889227
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
105889227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PH
PDZ_6
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
105889227
NCBI-ProteinID:
XP_012670481
Ensembl:
ENSCHAG00000013387
UniProt:
A0A6P3VG20
LinkDB
All DBs
Position
17:complement(12879405..12982623)
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AA seq
2039 aa
AA seq
DB search
MATRWSGSPHRDDENNQIVSPSCEAKQKGGVDTSDASGCVSPTGTGTGEDEPFSWPGPKT
LRLCRTSQGFGFTLRHFIVYPPESAVQSSLKEEDNGSRGRPRNRLEPMDTIFVKQVKEGG
PAHGAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDISLELCVMPKDEDILQLFSRDIT
ALAYSQDAYLKGNEAYSGNAQNIPEPPPVCYPRIESKASSGMAQTADHPTASAGSPRHTE
APASPSATPELGYRREITVPPSPPLLLTEVPKNQTVVCVCNESVRTVVVPPTDTLAAPSS
ERCPRGPRSGPSHRTEENRHTSGSSAGPQLQNTPSRPMEASRLPSPSARAASQLHPDNSP
SATSPNHYSPSPPASNCPSPGSPHQNIDWRNYTTYKEYIDNKRLYMYGCRTIQERLDSLR
AATVSHVNSVSQQQTPPPVTTASSTPLGLHSAGLSGSQVRRRSTSHDRAYVSPGVVTPLR
SVSQERLLGPPGERGLYRDWPRSASQDALPSSTLSGGAVKPRARSCDYLGRQGGGEGLAT
RLVDVDEQSHLIFQGNEARASRLCGSGRGGSQPLRNMGASVGFTDPSPAPRAESLGSSLA
SPHPASLAGGRASRLTVKAASLDASASAASYIASALASVQSHISGSSASQDPIKEQRPVA
VGNHLPHSSVPSHLQHRGRADSLKEPGSQEVSRGVRSASCSAPSKSPALRTLQQGGATNS
TPSAVTSNGTAPRLRAQVGRTESQEPANEKEGLEGAEAKVVVVMRREKSGPHPIRHPSYI
LAVNDAEAGGPGSPGSPGAGAEGGGVCWLPNDARREVHIRRFGEQHNASVSSLGDSLDSI
PFIDEPSSPSMDHDGTHIPASAVISVTPVTPVITTIPPSPTSPSPPIRRQLSHDQDSLRL
TILSSDSATKTERSKSCDEGLDNYREEGRGRGLKSLAGLRGLKKAVDKSSEDSGSSRRDS
SSDVFSDATKEGLLYLRQITSDKSKRIGGGMRPWKQMYAVLRGSSLCLYKDKKEGQAHAN
HQMDDEPQPISIRACLIDISYSDTKRKNVLRLTTSDCEYLFQAEDREDMLTWIRVIQENS
NEDEENAAVTSTDLINRKIKEYNSLMSPTSSKTEPSPKPSRQSISIRQTLMGGKGEAKGQ
SPHSPKHEHRAGDETSPPKDKGTWRKGMTGLMRKPFERKPPAGVTFGVRLDDCPPAINNR
FVPLIVEVCCNLVEERGLEYTGIYRVPGNNAAISNMQEELNHKGMGDIDVQDDKWRDLNV
ISSLLKSFFRKLPEPLFTNEKYADFIDANRIEDPTERLKVLKRMLHELPDHHYETLKFLS
AHLKAVADNSEKNKMEPRNLAIVFGPTLVRTSDDNMTHMVTHMPDQYKIVETLIQHYDWF
FTDGCTEEPVTAVRQENAVESQPVPNINHLLTNIGRTGPSPGDVSDSPTSDSAKSKQNSW
AYGKDQCSRELLVSSIFAAANRKRKKHKDKQQPSSSDDDLDSVFTLQDPVLPHDGVPAPQ
PKSPPAGGKEKRENGKATVAAADTPKSRKEHRNSFFLRDKRTISAPSPCPSPSPSPSPIL
RTPVALVLPKSSLSDGPSSSLLDEPTSDLGTMSSGASVPRGRPRRWLSSAGLEPGGGPLG
ASPGAEVSSITSDYSTTSSNTFLTGVESSLLSPEVGSVSGSRGGEEADDERSELISEGRP
AETDSDSDFPVFPSSGPSPAATTGAALSTPEVSTPPAQSAASCPAATPTSRPSLPSHRLI
ECDTLARRRSLRHKTDSDSSVDGVGAIGGGAGGAGTGVAGGGAKASSLTSSSGKRLSRML
EVMKKGRSTGSLSSTSRSDSERNAATTATTTTNTATNTTPSSSSSSSSANPSASEPNWRV
RFTERLKFRVRGSADDVLGAAASSQQRSHSPDAPRRSSRRNRGLRRRHTLGGQRDFSQLQ
AMHDWSEQGGVAQGADELTAVDHLRPKCGSQQDFSIHRWIAHERDVRGGPEPQTTVALAA
DQKPGGDGGGAPPPXGGEQVNGGGPQAKNKAGLCVGGDAHPHKLSGAQVVRSRFYMGVL
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgttggagtggctccccgcaccgagatgacgagaacaaccaaatcgtttca
ccaagttgcgaggccaagcagaagggtggtgtggataccagcgacgcctccggctgcgtg
tcccccacgggcacgggcacgggcgaggacgagcccttctcctggccggggcccaagacg
ctccggctgtgccgcacctcgcagggcttcggcttcacgctgcgccacttcatcgtttac
ccgcccgagtccgccgtgcagtcctcactcaaggaggaagacaatggaagcagagggaga
ccacggaacaggctggagccaatggacaccattttcgtcaagcaggtgaaagagggaggc
cctgcccacggagctggactctgcacaggggaccggatagtgaaagttaatggggagagc
ataattggaaagacctactcccaggtgatcgctttgatacagaacagtgatatttccctg
gaactttgtgtaatgccaaaagatgaagacatcctacaactgttctccagggacatcaca
gctttggcgtattcccaggatgcgtatctcaaagggaatgaagcgtacagtgggaatgcc
cagaacatcccggaacctccccctgtctgctatcctcgaatagagtccaaggcctcgtca
ggtatggcccaaacggcagaccacccgacagcctccgcgggctcgccccgacacacggaa
gcccccgcatccccctccgccacccctgagctgggctaccggcgggagatcaccgtgccg
ccctcccctcccctcctcctcacggaggtccccaagaaccagacagtggtgtgtgtatgc
aacgagagcgtgaggactgtggtggtccccccgacggacaccctggcggctccttccagc
gagcggtgccctcgagggccacgatcgggacccagccatcggaccgaagagaaccggcac
acgtctggctcttccgcggggccacagctgcagaacaccccatcccgacccatggaagct
tccagactccctagcccctctgcgagagcagcctcccagctgcacccagataactccccc
tcagccacctcccccaatcactacagcccctccccacccgcctccaactgcccctccccc
ggctccccccaccagaacatcgactggcgtaactacaccacctacaaggagtacatcgac
aataagcgcctctacatgtacggctgccgcaccatccaagagcgcctggacagcctccga
gccgccaccgtttcccacgttaacagtgtctcccagcaacagaccccgccccccgtcacc
accgcgtcgtcgaccccactcgggctccactcggctggcctctcggggtcacaggtcagg
agaaggagcacgtcacacgaccgggcgtacgtatcgcccggtgtcgtcacccccctgcgc
agcgtctctcaggagcgcctcctggggcccccgggggagcggggcctctaccgggactgg
ccccgcagcgcctcccaggacgccctgccctcctccacactgtcagggggagcggtgaag
ccgcgcgcccgctcctgcgactaccttggcaggcagggcggcggcgaggggctggccacc
cggctggtggatgtggacgaacagagccacctgatattccagggcaacgaggcgcgggcc
agtcggctctgcggctcgggcagagggggctcccagcccctcaggaacatgggggccagc
gtcggcttcacggacccgtctccagcgcccagggcggagagcttgggctccagcctcgcc
agcccacaccctgcgtcgctggcggggggcagggcctcgcggctgactgtgaaggccgcc
agcctggacgcctcggcctcggccgcctcctacatcgcctcggccctggcctcggtccag
agtcacatcagcggctccagcgcctcccaagacccaatcaaagaacaaagacccgttgcc
gtgggcaaccacctgccccactcgtcagtcccctcgcacctgcagcaccgggggcgtgcc
gacagcctcaaggaaccaggaagtcaggaggtgagccgtggggtgagatccgcctcctgc
tctgccccctccaaaagccccgccttaagaacactccagcagggtggagccactaactcc
accccctccgctgtgaccagtaacggcacagcgccacggctcagggcccaagtgggccgg
acagagagccaggagccagccaatgagaaggagggcctggagggggcggaggctaaggtg
gtggtggtgatgcgccgtgagaagtccggcccccaccctattcgacacccctcttacatc
ctggccgtgaacgacgcggaggctgggggcccggggagtccagggagtccaggagcaggg
gccgagggtgggggggtctgctggctgcccaatgacgctcggagggaggtgcacatccgg
agatttggggagcagcacaacgcctccgtctcaagcctgggcgactcactcgactccatc
cccttcatcgatgagccgtccagtcccagtatggaccatgacggaactcacatcccagcc
tcggctgtcatctccgtcaccccggtaacccccgtcatcaccaccatccctcccagccct
acctccccctcacccccgattcgccggcagctgtcacatgaccaagactccctgcgtctc
accatcctcagctcggactccgccaccaaaaccgaacgctccaagtcctgtgacgagggc
ctggacaactaccgggaagaaggaagagggaggggtctgaaaagccttgccggtctgaga
gggttaaagaaggcagtagataagtcctccgaagactcgggttcatccaggagggactcg
tcctcggacgtgttcagtgacgccaccaaagagggtctgctgtacctccgtcagatcacc
tcagacaagagcaagcgtataggtggcggcatgcgtccatggaaacagatgtatgcggtg
ctccgaggctcctccctctgcctgtacaaggacaagaaggaggggcaggcccacgccaat
caccagatggatgacgagccccagccaatcagcatcagggcctgcctgattgacatctcc
tacagcgacaccaagcgcaagaacgtgctgcggctgaccacgtcggactgcgagtacctg
ttccaggcggaggaccgcgaggacatgctgacgtggatcagggtcatccaggagaacagc
aatgaggacgaggagaatgctgcggtcaccagcacagacctcatcaaccgcaagataaag
gagtacaatagcttgatgagtcctaccagtagtaagacagagccatcacctaagccttca
cgccagtccattagcatcagacagacgctgatggggggtaagggagaagccaagggccag
agcccccactcccccaaacatgagcacagagctggagacgagacaagcccacccaaagat
aaaggaacatggaggaaggggatgacggggctgatgaggaagccctttgagaggaagcct
ccggcgggggtcacgtttggggtgcggctggacgactgcccccctgccataaacaacagg
tttgtacccctgatagtggaagtgtgttgtaacctggtggaggagcgtgggttggagtac
acagggatctaccgggtgcccggcaacaacgccgccatctccaacatgcaggaggaactc
aaccacaagggcatgggagacatcgacgttcaggacgacaaatggagagatcttaacgtg
atcagcagtttactcaagtcattcttccggaaacttcctgagcctctcttcacaaatgaa
aagtacgctgacttcattgatgccaatcgaattgaggacccgacggagaggctaaaagtg
ctgaagagaatgctgcacgagctgcccgatcaccactacgagaccctcaagttcctctct
gctcacctaaaggccgtggctgacaactctgagaagaacaagatggagccccgtaacctg
gccatcgtgttcgggccgactctggtccgcacgtcagacgacaacatgacgcacatggtc
acgcacatgccagaccagtacaagatcgtggagaccctcatccaacactacgactggttc
ttcaccgatggctgcacggaggaacctgtgacggcggtacggcaggagaacgccgtggaa
tcccagcccgtgcccaacatcaaccacctgctgaccaacatcggcaggacgggcccctct
cccggggacgtctcagattcacccactagcgactccgctaaatccaagcagaactcctgg
gcttacgggaaggatcaatgcagccgcgagctgctggtctcctccatttttgctgcggcc
aaccgcaaacgaaagaagcacaaggacaagcagcagcctagcagctccgacgacgacctg
gactctgtcttcaccctccaggaccccgtgctgccccacgacggggtcccggccccccag
cccaagagcccccctgcagggggaaaggagaagagggagaacgggaaagccacagtggcg
gctgccgacacgcccaagagccgcaaggagcaccggaactcgttcttcctgcgggacaag
cggacgatctctgccccctcgccgtgcccctctccatctccgtctccctccccgatcctc
cgcacgccagtggcactggtgctccccaagtcgtcgctgtccgacggcccatcctcgtcc
ctgctggacgagcccacatccgacctgggcaccatgagctcgggggcatctgtgccccgt
ggccggccccgccgctggctctcctcggcggggctggagcctggaggcgggcccctcggg
gcctctcccggcgcggaggtcagctccatcacctccgactactccaccacctcctccaac
accttcctgacaggcgtggagtccagcctgctgagccccgaagtggggtcggtgagcggc
agccgtggtggcgaggaggccgacgacgagcgcagcgagctcattagcgaggggcgcccc
gccgagacggacagcgacagcgacttccccgtcttccccagttccggaccgtcgccggcg
gcaaccacaggagcggcgctctccacccctgaggtcagcactccccctgcccaatcagcc
gccagctgtcccgccgccacgcccaccagccgcccttccctgccctcccataggctgatc
gagtgcgacacgctcgcccggaggcggtccctgcggcacaagacggacagcgattcgtcg
gtggacggggtgggggccatcggaggaggagcaggaggagcaggcactggtgtagcagga
ggaggggccaaggcctcgtccttgacgtcatcgtcagggaaacggctgtcgcgcatgctg
gaggtgatgaagaagggccgctcgaccggcagtctgagctccacgtcccgcagtgactct
gagcgcaacgctgccaccaccgccaccaccaccaccaacacagccaccaacaccacccct
tcctcctcctcctcttcctcttcagccaaccccagcgcctctgagcccaactggcgagtc
cgctttaccgaacggctgaagttccgagtgcgcgggtcggccgacgacgtcctgggcgcc
gccgcctcctcgcagcagcgcagccactctccggacgccccgcgccggtccagccgccgc
aaccggggcctccgccggcgccacaccctgggcggccagcgcgacttcagccagctgcag
gccatgcacgactggagtgagcagggtggcgtggcccagggcgccgacgagctgacggcc
gtcgaccacctccggcccaagtgcggctcgcagcaggacttctccatccaccgctggatc
gcccatgagagggacgtccgtggaggcccggagccccagacgaccgtggccctcgccgcg
gaccagaagccgggaggagacgggggtggagcgccaccccccncggggggagagcaggtg
aacggcgggggaccacaggccaagaacaaagcaggactgtgcgtaggaggtgacgcccac
ccacacaaactctctggggcgcaggtggtgcgctcacgcttctacatgggtgtgctgtga
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