Clupea harengus (Atlantic herring): 105889230
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Entry
105889230 CDS
T09045
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105889230
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Other domain-containing proteins
Patched domain-containing proteins
105889230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Syndecan
Motif
Other DBs
NCBI-GeneID:
105889230
NCBI-ProteinID:
XP_031439978
Ensembl:
ENSCHAG00000013375
UniProt:
A0A6P8GLG1
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All DBs
Position
17:complement(12857971..12873537)
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AA seq
877 aa
AA seq
DB search
MTGFRTDCVQKPLSLLFEKLGYLVGSYPVCFMVIPLLVSAGLGGGFYFLADREDNDIEQQ
FTPTNGWSKEARRFVRDNFPHDDSMFSIQRLYTEGNYASVILSSKNNSNIFTEVAFEDII
HLDGKVKNISVDSNDRHLRYENLCAKMKDKCMPNVILNIIGYDPQKIERANISFPLHKVK
GRPEFLGFTVGGVNLSEGLVQSAQAVRLFYFLEDGGNSYLWLKQFQRVMLSENSYDEIKI
SLFTSLSRQEEFEKHTPDGIPLFSITYSLVISFSVISCLRFDNVRNKVWVAFVGVLSAGL
AVLSSFGFMLYIGVPFVITTVNAPFLILGIGVDDMFIMVSNWQQTNVKDPVEKRMADTYK
EAAMSITITTVTDILGFYIGLMTDFPSVQYFCLYTSTAIFLCYVYNITFFGAFLALNGRR
ESRNGHWLTCMQIPSKRPEESSRCSALCCVGGHYDEEKGSETEHPMNRFFKRHYGPFLIK
PWTKVGVVLLYVGYVTLAVYGCFQVQEGIEMSNLAADDSYVNKYYADERRYFSGYGPTVM
VMVRGEYPYWEEPKRTALRSCLNEFTELSFVSKDVNMSWLDIYEDYSRLAPFSLNNKTTF
MSNLPMFFTLVPELSLDVNITDEEIYASRFFIQTVNIANTTMEIKMFNELRETAEKCKIA
DILVFHPAFIFFDQYDILESSTVQSIGFTALVMLVISLLLIPNPICSLWVTLSIGSVITG
VTGFMALWNVNLDTISMIILVVCVGFTVDFSAHISYAFVSSEKPSADEKAIDAVFHLGYP
VLQGAVSTIIGVIVLATSKNYIYRTLFKIMFLVMVLGLVHGLVFIPVFLTLLSFNCTNKD
KKSYDFEDNFKTAQKAIIYENKAFQTENEPCVCTIST
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgacgggctttcgcacagactgtgtccagaaacccctctctttgctttttgaaaagctt
gggtatctggttggatcttaccctgtctgtttcatggtcattcctctgcttgtctctgct
ggtctaggagggggattttactttctggcagaccgggaggacaatgacatcgaacaacaa
tttacacccactaatggatggtcaaaggaggccaggaggtttgtcagagacaattttcca
catgacgactccatgttctccatccagaggctgtacactgaggggaattacgcatcagtt
atcttatcatctaaaaacaacagcaacatatttacggaggtcgcttttgaagacatcatt
catctggacggcaaagtgaaaaatatctctgttgattccaatgacaggcatttaagatat
gaaaacctgtgtgccaaaatgaaagacaagtgcatgccgaatgtaatattaaacatcatt
ggttacgatccccagaaaattgaacgtgcaaatatcagttttcctctgcacaaagttaaa
ggcagaccggagtttcttgggtttacagtcggaggagtcaacctatcggagggtctggtt
cagagtgcccaggctgttaggctcttttacttcttagaagatggtggaaactcctacttg
tggctaaagcagttccagagagtgatgttatctgaaaacagctatgatgaaattaagata
tctctcttcacttccttgtccaggcaagaggagtttgagaagcacacaccagatggcata
cctctgtttagcattacttattcattggtcatctccttctctgtcatttcctgcttaagg
tttgacaacgtgaggaataaggtgtgggtggccttcgttggggtgctctctgcaggcctg
gctgtgctctctagctttggcttcatgctctacatcggggttcccttcgtcataactact
gtcaacgctcctttcctcatactggggattggtgttgatgacatgttcataatggtctca
aactggcagcagaccaacgtcaaagaccctgttgagaagcgcatggcggacacctacaaa
gaggcagccatgtccatcaccataaccaccgtgacggacatcctcggcttctacatcggc
ctcatgaccgacttcccgtccgtccagtacttctgcctgtacaccagcaccgccatcttc
ctgtgctatgtctacaacatcacgttcttcggagccttcctggcactcaatggcaggaga
gagagcaggaacgggcactggctgacctgcatgcagatcccgagcaagagacctgaggag
agctccaggtgtagcgccctctgctgtgtggggggtcactatgacgaggaaaagggctct
gagacggagcaccccatgaaccgcttcttcaagagacactatggtcccttcctgatcaaa
ccatggacgaaagtgggcgtagtgctgttgtatgtgggctacgtgaccctggctgtttat
ggttgcttccaggttcaggagggaatcgaaatgagcaatctggccgctgatgattcttac
gtgaacaagtactatgcggatgaaaggagatacttctctgggtacggaccgactgtgatg
gtgatggtgagaggggagtacccgtactgggaggaaccgaagcggaccgcgctgagatct
tgtctgaatgagttcacggagctgagcttcgtcagcaaggacgtcaacatgtcatggctc
gacatctacgaggattattctcgcctcgcaccctttagcttgaacaacaagaccacgttc
atgtcaaaccttccaatgtttttcactctcgtgccagagctcagcctcgacgtgaacatc
acggatgaggagatctacgcctcgcgtttctttatccagacagtgaacattgccaatact
acaatggagatcaagatgtttaatgagctcagggagacagctgagaagtgcaaaatcgct
gacatactggtttttcatcctgcattcatcttctttgaccagtatgacatcttggaaagc
agtactgtccagagcattggcttcacggctctagtgatgttagtcatctccctccttctg
atcccaaacccaatctgctctttatgggtgaccctctccattggctcagtcatcaccggg
gtaacaggcttcatggcattatggaatgtcaacctggacaccatatccatgatcatcctg
gttgtgtgtgttggcttcactgtggacttctctgctcatatctcatatgcgtttgtgtcc
agtgagaaaccgtcggccgatgagaaagccatagatgctgtctttcacctgggctaccct
gttttacaaggggccgtatccaccataataggggtgatagttttggcaacttcaaagaac
tatatctaccgtaccttattcaagattatgtttctggttatggttcttgggttagttcat
ggcctagtgttcatcccagtgtttttgaccttgctgtccttcaactgcactaacaaagac
aagaaatcctatgattttgaggataactttaagactgcccagaaggccattatttatgaa
aataaagcctttcagacagaaaatgagccatgtgtgtgtacaataagcacatag
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