Clupea harengus (Atlantic herring): 105889235
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Entry
105889235 CDS
T09045
Symbol
pks1
Name
(RefSeq) phenolphthiocerol/phthiocerol polyketide synthase subunit C
Organism
char
Clupea harengus (Atlantic herring)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
PKS_DH_N
adh_short
CurL-like_PKS_C
adh_short_C2
RhiE-like_linker
Thiolase_N
PP-binding
ADH_N
ACP_SdgA_C
DUF8102
ACP_syn_III
PA_Ig-like
Motif
Other DBs
NCBI-GeneID:
105889235
NCBI-ProteinID:
XP_031440229
Ensembl:
ENSCHAG00000008007
UniProt:
A0A6P8GM70
LinkDB
All DBs
Position
17:complement(12518547..12525828)
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AA seq
2075 aa
AA seq
DB search
MYEDIAVIGIGCNFPGGEGLDNFWRVLVEGKNCTVEIPDERFDCSSWYDPDDSRPGKTQT
TKAALIDGFNELDHKFFGITEAEADFMDPQQKLLLECSYRALEDAGIPMEKISGTRTGVY
IGLMNRDYETLLNNSPSTITHYNGTGTAMSVAANRISYTFNLTGPSFAIDSACSSSLVAL
HSACQAIRQGDCEMALCGGVNCILEPRVFVALSKAKMISSDGTSKPFSSRANGYGRGEGC
GVVLLKPLRKALEGFHHIWGIISKTAVNQDGRTVTPITKPSMVQQEELLRRIYSTESDLT
SVQYIEAHGTGTPVGDPIEAGSISNAVAQARPRGSETIIGSVKGNIGHTESAAGVAGLIK
VLLMMKHETIVPSLFYSEESSSIDAKALNIRIPTEAEKWKQTNPGGRVAGVNNFGFGGTN
AHAVIREHIQTPNSILARSETRKCFTLSAMTETSLRMCISDTHQRLSTGEPVDLKNIAYT
SACRRGHLKHKYRKAFLSSSVAELKEQLRMALDKKIIPSKPDLKLVFVFCGNGVTYRGMC
KQLYKEPIFREKVREVENLFQNHRSTCISQKIVNDYDNDDYSKPEVVQPLLFAIQVALVN
LLKHWGIRPDAVLGHSVGEVAAAHCSGLLSLADAVKVIYYRSALQGSVTGGKMLVVGNVA
VADILKILSSYTAKVCLAAINSPVSCVLSGHKDAVDNLHQKLKTSVMTKNLFLHVLDVPA
AYHSHMMDPILSQIKESIGALDVNEMDCELLSTVTGKTSSAEDFTTGEYWARNIREPVAF
QQAIESAVKDKTNVVFIEISPRRALQRNIMEVLGNDITVLSSVQPDRDHETLVSTVARLF
ELGSQIAWDSVYRGSESQTMAFPRYQFDCLKKEVNFESVRQGNDILPHSVHPLLTQMKRN
SKQFKCNLSSNVTSYLWEHKNNGVVIAPGSLYVELALEAAMQFIRPKKPLCSLQLSVTFQ
SLFVLSKESNQLTVLLEPSDGKTRFEIRSSSTVHASGAITYGTGPAVIEEGVISCNTVSK
RCPVVITKEEVYSHLSLAGFEYGPTFRLLDEICYGGEFREALTTITVPDELLSQLYEYRL
HPVVLDCFLQMTSVVAQDGSCAIPCFPSAIERVVISRPLQRVMIMYLRVTQETYEFYEVC
GCFADPLGHVLVELKDLRITFVQGCPQVVEFFHNDFRSFTYDMSVGNSPKALVFEDTLGV
AKALKPYLHPQSTFVSLSKPAPSVPALLTQCLETKAGVEFTEVLFMWGIQDLSQMKIETI
LDSLVECCEFYRQIALTLREYSCSYFIRVITYRSSGHIVDHISPGFVLSGMTRALAAEMS
GFSFQLIDLASVSNEDIQVLAYVISCQQSRQHPEIMISKGQVHLATITRSPFHDSRNTET
CIHSLPSQRFTLQTADPYRMGKLSAVTVSFDDDPILDKTLEVRLNKICVHSSDYFPVSIS
DFKFGRTMYWSKHSTQSHKLLALDFCGTVTAVGKGVRKLKVGDHIASCYPIIASSKIIIP
EEVCYNIAKLPFLRVPCVSYFVLAREIFDNVLPKDKPKMAMTVLSSVPKTLAKLLVEVGK
TKGLNVNIQTEINDQNADCAVIILLPPYDQSLVVSASRISSVKHIVVVCNEELTSLSHLI
QQKNRNVCVHVLKTSSVFQKANLKREGPYLDHWLHGMTFGKICMTIQENTFQREVFPDRT
SCTQSHSYFNVENISLIVCTKNDSIHTETNVPLLPQAKELFRKRSVYIVSGGLSGLGLET
VKFIAHRGGEYIVSLSRSVPSDEIQHRVSGLQRQYGVSVMTLKCDVSLVKDVVEAFTAIG
QRFPSCPIRGVFHSAAVLHDGLIETLDSSHFKKVLKPKVSGALNLHYATLHSKLEYFVCY
SSISSFLGNASQTNYAAANSFLDIFCHYRRNLGLAGQAINWGPLNLGLLLNKVHFQRFLE
AKGLTIMEVSETHEALARCLLTNNTQQVVCKFNFRNLQNHVLSQNASLRVRLSPLVEQEL
EMRGQETEPKVHPVNTEEDYVKSLLSDLSNADICELRESSTLTSLGIDSMSAMTMQNHIF
KDWGVTVPLVKILDPNCTMSSLVLILKQSTDVGIE
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggacattgcagtaatcgggattggatgtaatttccctggaggtgaaggtctt
gacaacttctggagggttctagttgagggaaagaactgtactgtagagattccagatgaa
cggtttgactgctcatcctggtacgatcctgacgacagcagacctggaaaaacacagact
accaaggcagctcttatagatggatttaatgagttggaccacaagttctttggcattact
gaggcagaggcagactttatggacccccagcaaaagctgctactagagtgctcctacaga
gccctggaggatgctgggatacccatggagaagatcagcgggaccaggactggagtttac
ataggcctcatgaacagggactatgagaccctgctaaacaacagcccgagcacaataacc
cactataatggcactgggacagctatgagtgtggctgccaacaggatctcctacacattc
aatctcactgggccttcatttgccattgatagcgcttgctcctcgtctttagtagcactt
cactctgcctgccaggccatcagacaaggtgattgtgagatggctctttgtggaggagtc
aactgcattcttgagccaagagtcttcgtggctctcagcaaagccaagatgatctcatct
gatggcaccagcaaaccattctccagcagagcaaatggatatggcaggggagaaggttgt
ggagttgtcctgctgaaacctttgaggaaggctcttgaaggctttcatcatatatggggc
attatcagcaaaacagcagtaaaccaagatggtcgcactgtcactccaatcaccaagccg
tccatggtccagcaggaggaacttctcaggaggatctactccacagagagtgacctgacg
agtgtccagtacatagaggctcatgggactggaacaccagtaggtgacccaatagaagca
gggagcatctctaacgccgtcgcccaagctaggcctcgtggatcagagacaatcattggc
tctgtgaaaggtaacataggacacactgaatcagcagctggtgtagcaggattgattaag
gttcttctaatgatgaaacatgagaccattgtcccctcattgttctactcagaggaaagt
tcaagcattgatgctaaagctttaaatataaggattcctacggaagcagagaaatggaag
cagacaaatcccggtggtagagtggctggcgtcaataactttggctttgggggcaccaat
gcccatgctgtcataagggaacacatacaaacacctaattcaattcttgccagatctgag
acaagaaaatgcttcactctttcagccatgacagagacgtccctcaggatgtgtatttca
gacactcatcaaaggcttagcacaggtgaaccagtagatctaaaaaacattgcttacacg
tcagcgtgtaggagaggtcacttaaaacataaatacaggaaagcatttttgtcatcttca
gttgcagaactaaaagaacagcttaggatggctctcgataaaaagatcatcccatccaag
ccagacttgaagttggtgtttgtgttctgtggcaatggagtcacctacagaggcatgtgt
aaacagctgtataaagaacctatttttcgagagaaagtaagggaagtggaaaatcttttc
cagaatcacaggagcacatgtatttcccagaagatagtgaatgattatgacaacgatgac
tattccaaaccagaggttgttcaacccttgctcttcgccattcaggttgcacttgtaaat
cttctgaaacattggggcatcagaccagatgctgttcttgggcattctgtaggagaagtt
gctgctgcacattgctctgggctgttatctcttgcggacgctgtcaaggtgatctactac
cgaagtgctttgcagggaagtgtcactggcgggaaaatgcttgtggttggcaatgtagct
gttgctgacattttgaaaatcctatcgtcttacacagcaaaggtttgtctggcggctata
aacagtcctgtatcctgtgtattatcaggtcacaaagacgcagtagacaacctgcaccaa
aagctgaaaacttcagttatgactaaaaacctctttctccatgttttggatgttcccgct
gcttatcacagtcatatgatggatcctatattaagtcagatcaaagaaagtataggagct
ctagatgtaaatgaaatggattgtgaacttctttcaacagttacagggaagacatcatct
gcagaggactttaccacaggtgaatactgggcaaggaacatccgtgagccagttgcattt
caacaggcaatagaatcagcagtcaaggacaaaacgaatgtggttttcatagagataagc
ccaaggagggctttgcagaggaacattatggaggtgctagggaatgatattaccgttttg
tcttcagtgcagccagacagagaccatgagacacttgttagtactgtggctagacttttt
gagctagggtctcaaatagcctgggacagtgtctacagagggtctgagagccaaacaatg
gccttccccaggtaccaatttgactgtctcaaaaaagaggttaactttgagtctgtgagg
caagggaatgacattttaccccattctgtgcatcctctactgacacagatgaagagaaac
agcaaacagtttaagtgtaatctctcatccaatgttacatcctacctttgggagcacaaa
aacaatggagttgtgattgcacctggttctctgtatgtggagctagctttggaagctgct
atgcagttcatcaggccaaagaagcctctgtgttctctacagcttagcgttacgttccag
agcttgtttgtgctcagcaaggagtccaatcaattgacagtgcttcttgagccatctgat
ggcaagaccagatttgaaatacggtcttcgtccactgtgcatgcatctggcgccattacc
tatggaacaggtccagcagttatagaggaaggggtcatcagttgtaatactgtctcaaaa
aggtgcccagtggttattacaaaagaggaggtatattcccacctctcattggctggattt
gaatatgggcctacattcagactactggatgaaatttgctatggaggagagttcagggag
gccctgaccaccatcacagttccagatgaactgctgagccaactgtatgagtacaggttg
caccctgtggtactggactgtttcctacagatgacatctgtggtggctcaagatgggagc
tgtgcaataccttgtttcccctctgccattgaaagggtggtgatctccagaccactgcag
agggtgatgatcatgtatctgagggtgactcaagagacatatgaattttatgaggtgtgt
ggctgttttgcagaccctttgggtcatgtgttagtcgaactaaaagatttgaggatcaca
tttgtgcaaggatgccctcaggttgttgaattctttcacaatgactttagatcctttaca
tatgacatgagcgttggaaacagcccgaaagccttagtatttgaagatactctgggagta
gctaaagctctaaagccttatttacacccacaatctacttttgtttccctctcaaaaccg
gccccatccgttcctgctttgctcactcaatgccttgagaccaaagctggtgtggaattt
acagaagttctgttcatgtggggaattcaagacctgagccaaatgaaaattgagactatt
ctggacagtttagtcgaatgttgtgaattctaccgacaaattgcacttactttgagggag
tacagctgctcatatttcatacgcgtgatcacctacagatcatctggtcatattgttgat
catatcagtcctggctttgttttgtcaggtatgacaagagccctcgcagcagagatgtca
ggcttctcgtttcaattaattgacctggcatctgtgtcgaatgaagacatacaggtgtta
gcctatgtcattagctgccagcagagcagacagcacccagagattatgataagcaaaggt
caggttcatttagccaccataacaagaagtccatttcatgattctagaaatacagagaca
tgcatccattctttgccatctcaaagatttaccctacagactgcagatccctacaggatg
ggtaaattgtcagcggttacagttagttttgatgatgaccccattctggataaaactttg
gaagttagacttaataaaatatgtgtccattcatctgactactttccagttagtatctct
gactttaaatttggtcggacaatgtactggtccaagcactccacccagagccacaagctc
ctggctctggacttctgtggcaccgtcacagctgtggggaaaggtgtgaggaaactgaaa
gtaggagaccacattgcatcctgctaccccattattgcttcctctaagatcataattcct
gaggaagtatgctacaacattgcaaaacttccatttttaagagtcccatgtgtctcgtac
tttgtacttgcaagggaaatctttgacaatgtattacccaaagacaaaccgaaaatggcc
atgacagttctttcatcggttcccaaaactttagcgaagttacttgttgaggtaggaaag
actaaggggttgaatgtgaatatccagacagagataaatgaccaaaatgctgactgtgcc
gttatcatcctgctgcctccttatgatcagtctttggtggtgagtgcaagcagaatatct
tcagtgaagcacatagtagttgtctgtaatgaggaattgacctcactctcgcatcttatt
caacaaaaaaatcgaaatgtctgcgtccacgttctgaaaacgtctagtgtttttcagaaa
gccaaccttaaaagagagggtccatatctggatcactggctacatgggatgacttttggt
aagatctgtatgaccatacaagaaaacacctttcagagagaagtctttcctgataggaca
tcttgcacacaatctcactcatactttaatgtggagaacatctctttgattgtgtgcacc
aagaatgattctattcatacggaaacaaatgtccccttgctcccacaagccaaagaactc
ttcagaaagaggagtgtgtacatcgtatcgggggggctatctgggctggggctagagacg
gtgaagttcatcgctcacagaggcggagagtacattgtttccctctccaggagtgtgccc
tcagatgagattcagcacagagtcagtggactacaaaggcagtatggagtctctgtgatg
actctcaagtgtgacgtctcattagtcaaagatgtagtggaagctttcacagccattggc
cagaggtttccctcctgccccatccgaggtgtgttccacagtgcagctgtgctacacgat
ggcttgattgagacccttgacagctcacattttaagaaagtgctgaaaccaaaagtgagt
ggagctttaaacctgcactatgcaacactgcacagcaaactcgaatactttgtttgctat
tcctccatctcctctttcctgggaaatgcctctcaaactaactatgccgctgccaactct
tttttggatatcttttgtcattaccgccgcaaccttggacttgctgggcaggccatcaac
tggggaccccttaacctgggccttctactgaacaaagtacattttcaaaggttcttagaa
gcaaaagggttgacaatcatggaggtctcggagacacatgaggccttggcgcgatgcttg
ttgacaaacaacacgcaacaggtcgtttgtaaatttaatttcagaaacctgcagaaccat
gtcctttctcaaaacgcgtctctcagggtacgactgtcgccactggtagaacaggagctc
gagatgagagggcaagagacagagccaaaggttcaccctgtgaacactgaggaggattat
gtgaaaagcctgcttagtgacctgagtaatgctgacatttgtgagttgagagagagcagt
acacttacttcattaggtattgattcgatgtctgccatgactatgcagaaccacatattt
aaagactggggtgtgactgtgccgttggtaaagatactggatcccaattgcaccatgtcc
agtctagttctaatcctaaagcagagtactgatgtgggtattgaataa
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