Clupea harengus (Atlantic herring): 105889236
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Entry
105889236 CDS
T09045
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K24682
patched domain-containing protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105889236
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Other domain-containing proteins
Patched domain-containing proteins
105889236
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
105889236
NCBI-ProteinID:
XP_012670489
Ensembl:
ENSCHAG00000007975
UniProt:
A0A6P3VF12
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All DBs
Position
17:12508974..12517602
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AA seq
984 aa
AA seq
DB search
MPVTMAGCHTDCVEKPISIAFQMFGRFVGRHPWWFFLSPLFISAVLGSGFYFLEDREAND
IEEQFTPVNGPAKLERLFVQENFPQNDSVFSNQRVFTDGVYASFIAVSKSPNILTEDALD
EILNLDKKVRELNVSMGHEVLTYEGLCARKYNKCMPNKILDVVNYYGNKIERTELTFPSL
RFGFTHIFLGYSVGGVTLNSSVIKRAKAVRLFYFLKDGNRSTTNLWLNEFLRVFPTSNLK
FVRVTHSTSLSRQVEFEANTRDVIPLFSITYVIAIVFSILSCLRFDCVRNKVWVATFGVI
SAGLAVLSSFGMMLHIGVPFVMTVANSPFLILGIGVDDMFILLSCWQQTNVHDKVEDRLA
NTYKEAAISITITTLTDVLAFYIGLMTPFRSVQSFCLYTSAAILFCYIYSITFFGAFLVL
NGQRENSNKHWLTCKEVPEEGTVGQSKWYNLCCVGGAYDPHTGTEEVQPMNHFFKTYYGP
FLTKSGTKLLVILFYCIYLCVSLYGCFQIQEGIDLRNLAADDSYVVRYYNDEKEYFSEYG
PNIMVIIRGEFPYWDEKKMSDLETCVEDFKNLTFIEKDIFTSWLKSYKYYGYHTNLNLNA
EHVFKKNLSLFLRFYSDFKQDVNFTNNSIHASRFFVQTVNISTALDEMNMLNKLRDTARK
CPVPLLVYHPAFIYHDQYAVIVVNTIQNVAVTAAVMLFISLMLIPNPLCSLWVTFSIASI
ILGVTGFMALWDVNLDAISMIILVVCIGFSVDFSAHISYAFVSSKKPSANEKAVEALFHL
GYPILQGALSTILGVVVLSASKNYIFRTFFKIMFLVIFIGLFHGITFIPVFLTFFDMCRS
PAKIRNQNEQEGQAMANCQAKSKQKNGREDEDKDKQIYVNHMFVPDSNNQVCQSQTCPAI
WTVVLNNQHTANDQVCPASTIPMFTVDSETYEVHMHTPSNNALVTESCYQKQASHEHQNC
VRVNNLSDGNVPVSPNCSDAVSHE
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaccatggctggctgtcatacagactgcgtggagaaaccgatctccatcgcc
tttcagatgtttggacgttttgtgggaagacacccttggtggttctttttatctccttta
tttatttctgctgtgctcgggagtggattttattttctggaagatcgtgaagctaatgac
attgaggagcagtttacacctgttaacggccctgccaaactagagcggttgtttgtccag
gagaactttccacagaacgactcggtgttttccaaccaaagggtcttcacggatggagta
tacgcatcgttcatcgcggtctcgaaatcgcccaacatccttactgaagatgcactcgat
gaaatattgaatttagacaaaaaagttagagagctgaatgtttcaatgggtcatgaagtg
ttaacttatgaggggctatgtgccagaaaatataacaaatgcatgccaaataagatactg
gatgttgtgaattattatggcaacaaaatcgagcgtactgagctcacttttccctctcta
agatttggatttacacatatttttctaggatattctgtcggtggagtaacgctcaattca
tctgtgatcaaacgcgcaaaggctgtgcgacttttttatttcttaaaggatggcaaccgt
tccacaacaaatttgtggctcaatgaattcctcagggtgtttcccacaagcaacctaaag
tttgtcagggttacccattcaacctctctgtcaagacaggtggagtttgaagcaaacaca
agggatgtcattcctttgttttccatcacatatgtaattgccattgttttttcaatcctg
tcttgcttaagatttgactgtgtgaggaataaagtgtgggttgccacctttggtgtgatc
tctgctggactggctgtgctctcttcctttgggatgatgcttcacattggagttcctttt
gtcatgacagtggccaactcaccctttctgatattagggattggagtcgatgacatgttc
atcctcttatcttgctggcagcagaccaacgtccatgacaaagtggaagatcgtttggcg
aacacctataaagaggcggctatctccatcaccatcaccactctgaccgacgtcctggcc
ttctacattggcctgatgactccattccgctcggtccagtccttctgcctgtacaccagc
gccgccatcctgttctgctacatctacagcatcacgttcttcggggcattcctggtgctg
aacggccaacgggagaacagcaacaagcactggctgacctgtaaggaggtgccggaggag
ggcaccgtgggtcaatccaaatggtacaacctatgctgtgtgggaggggcgtatgacccc
cacaccggcacagaggaggtacagcccatgaaccacttcttcaaaacgtattatgggcct
tttctgaccaagtctgggactaagcttttggttattctattctattgcatttacctgtgt
gtcagtctgtatggatgctttcaaatccaggaggggatagacctgcgcaaccttgcagct
gatgactcttatgtggtacgatattacaatgacgaaaaggaatacttttctgagtatggt
ccaaatattatggttatcatacgtggggaatttccctactgggatgagaaaaagatgtcg
gatcttgaaacatgcgtagaagatttcaaaaacctgacgtttattgagaaggacatattt
acctcatggctgaaatcatacaaatattatggatatcacaccaacctgaatttgaatgct
gagcacgttttcaagaaaaaccttagcttgtttttgagattctactcggatttcaagcag
gatgttaatttcacaaacaattctatccatgcctctcgttttttcgtccagactgtgaac
atatctacggctcttgatgaaatgaatatgctcaacaaattgcgagatactgccaggaag
tgtccagttcctctactggtctatcacccggcatttatctatcacgaccagtatgctgtt
atcgtcgttaacactatccagaatgttgcagtcaccgcagctgtgatgctgtttatttcc
cttatgttgattccaaacccattgtgttccctctgggtgacattttccatcgcctctatc
atcttaggggtgacagggttcatggccctctgggatgtgaatttagatgccatctccatg
atcattctcgtggtgtgcattggcttctctgtagatttctcagctcacatctcatatgcc
tttgtgtccagcaagaagccaagcgcaaatgaaaaagccgttgaggcactctttcacctt
ggctatcctatattacaaggagcactttccactatactaggggttgtggtgctctcggcc
tccaagaactacattttcaggactttcttcaagatcatgttcctggtgatcttcattggc
ctctttcatggcatcacattcattccggtgttccttaccttcttcgacatgtgcagaagc
ccagcaaaaattcgcaatcaaaatgagcaagagggtcaggccatggccaactgccaagca
aagagcaagcagaaaaatgggagagaggatgaggacaaagacaagcaaatctacgtcaat
cacatgttcgtgccagacagcaataaccaggtgtgtcaatcacagacatgccctgctatc
tggacagtggtgcttaacaaccagcacactgcaaatgatcaggtgtgcccggcaagcacc
attcctatgttcacggtggacagtgagacctatgaggtccacatgcacacaccaagcaac
aatgctttggtcacagagagctgctaccaaaagcaggcatctcatgagcatcagaattgt
gtcagggtgaataacctgtctgatggaaatgttccagtgtctcccaattgctctgatgca
gttagtcatgaatga
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