Clupea harengus (Atlantic herring): 105889272
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Entry
105889272 CDS
T09045
Symbol
pou6f2
Name
(RefSeq) POU domain, class 6, transcription factor 2
KO
K09368
POU domain transcription factor, class 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105889272 (pou6f2)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
105889272 (pou6f2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
LMBR1
FtsX_ECD
Motif
Other DBs
NCBI-GeneID:
105889272
NCBI-ProteinID:
XP_042566252
Ensembl:
ENSCHAG00000004172
UniProt:
A0A8M1KQU5
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Position
17:complement(8701890..8802853)
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AA seq
795 aa
AA seq
DB search
MAPRDPLITCLLPTVQVEARPAGKQSTHLPRILTIPGRSILHADVSGMAERAGIRRRPQE
PMITGQLSKPLLSLRGDMDASELHADDKPGSPDSDLTDEPLLLSADNDADEKLYGVRGGS
ALSDASSSPSEQSQLGQTHPAYPLGPQSLLVAQQLASAVSGVMSGGAPGLNQPILIPFNA
GGHLGGQQGLVLSLPTANIQGLVAAAAAGGLMTLPLQNLQATSSLSSQLQHLQQLQQLQQ
HHHQQQQQHLQQQQQQQQQQQQQQQQQQQSQHCTQSHLQGANHMAPHHPLSPASQQQSSS
GSISSASSNHSSAQAPQSPPHRQQNQSPARSLPSPVTPPMPLTVSPRLYLYVSRIGSTVW
RFLTQFSVVLPQLNPLASQAAVAAAAAMSSIAGSQVFGNALSSLQGVTGQLVTNAQGQII
GTIPLMPNSAGTANQSGGGNPALQVQPITPQLLTNAQGQIIATVIGNQILPVINTQGITL
SPIKPGQQLPQAQSAQSGPPSSQANLLRLPHSQSPLRQASSSSSTSSSSSSLSVGQLVSN
PQTAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICSWTGK
PHQVTETGRMALAEAGHRSKILLSQFSPRHTILRGHFYLPQEAQENTIASSLTGKLNPGL
LYPARFEKLDITPKSAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFT
PQALEILNSHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKPEIGP
GAPMDPLGDSLEEHP
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcccctcgtgaccctctcatcacttgccttctccccacagtgcaggtagaagcaagg
cctgctgggaaacaatcaacacatttacctcggatcctaacaattccagggaggtcgata
ctccatgccgatgtgtcgggaatggcagagagggctgggatccgcaggcgtccacaggag
ccaatgattactgggcagttgagcaagccgctgctctccctgcgcggcgacatggacgcc
tccgagctccacgcggacgacaagccgggcagccccgacagcgacctgaccgacgagccc
ctgctcctgtccgctgacaacgacgcagacgagaagctctacggtgtccgcgggggctct
gccctgtctgatgccagcagcagtccctctgagcagagtcagctgggccagactcaccca
gcctatccccttggaccacagagtctcctggtggcccagcagctggcgtctgccgtgagc
ggggtgatgtccgggggcgcgccgggcctcaaccagcctatcctcatccccttcaacgcg
ggcgggcacctgggcgggcagcagggcctggtcctctccctgcccaccgccaacatccag
gggctggtggccgcggccgcggccggaggcctcatgaccctgcccttacagaatctgcaa
gctacctcttccctgagctcacagctccagcacctgcagcagcttcagcagcttcagcag
catcaccaccagcagcagcagcaacaccttcaacaacaacaacaacagcaacaacagcaa
cagcagcagcaacagcaacagcagcagtcacagcactgcacccagtcccacctccaggga
gccaatcacatggcgcctcaccacccgctgagccctgccagccaacagcagtcctcctct
ggctccatctcctcggcttcctccaatcacagctcggcacaggccccacagtctccgccc
cacaggcaacaaaaccagtcgccagcgcgcagcctgccctccccggtgacccctcccatg
ccacttacggtgagcccacgactttatctgtatgtctcccgtataggtagtacagtatgg
cgttttctaacccagttctccgttgttctcccacagctcaaccctctggccagccaggcg
gctgtggcagcagcagcggctatgagctccattgctgggtcccaggtgtttgggaacgcg
ctctccagcctgcagggcgtcacgggccagctggtcaccaatgcccaaggacagataatt
ggaacaatcccattgatgcctaactcggcaggaactgctaaccaatcagggggagggaat
cctgctctacaggtccagccaatcacacctcagctgctgaccaatgcccaaggccagatc
atcgccacggtgatcggcaaccagatcctgccagtcatcaacacccagggaatcacgctg
tctccaatcaagcctggacagcagctgcctcaggcccagtcggctcagtcggggcctcca
tcctcccaggccaacctgctgcgtctccctcacagccagagccccctccgccaggcctct
tcatcctcctccacctcctcctcctcctcctccctcagcgtgggacagctggtcagcaac
ccccaaactgcccccagcgaggtggatggtgtcaacctggaggagatccgggaatttgcc
aaagcgttcaagatccgccgattgtctctggggctgactcaaactcaggtgggccaggcc
ctcagcgccacagagggacctgcctacagccagtctgccatctgcagctggaccgggaag
ccccaccaggtaacagagacgggcaggatggctctggctgaggcagggcaccggagtaag
attcttctctctcaattctcccctagacacaccatcctgagaggccacttttacctacca
caggaagcccaagagaacactatagctagcagtttgacaggcaaactgaaccctggcctt
ttatatcctgccaggtttgagaagttggacatcactccaaaaagcgcccagaagattaag
cccgttctggagcgctggatggccgaggccgaggcccggcaccgatccggcatgcagaac
ctgaccgagtttatcggcagcgagccgtcaaaaaagcgcaagcggcggacctcgttcacc
cctcaggccctggagatcctcaacagccacttcgagaaaaacacgcacccgtccggccag
gagatgacggaaatcgctgagaaactgaactatgaccgcgaggtggtccgcgtctggttc
tgcaacaagaggcaagcgctgaagaacacaataaagaggctgaagcccgagatcggccca
ggagctcccatggaccctctgggagattccttggaggagcacccctaa
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